Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq171586 132 1e-25 seq152076 129 1e-24 seq152203 125 2e-23 seq105056 100 7e-16 >seq171586 Length=8203 Score = 132 bits (146), Expect = 1e-25 Identities = 159/215 (74%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || ||||||||||| |||| | || | |||||| Sbjct 2215 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCT 2274 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| |||||||||||||| | | ||| || ||||| || Sbjct 2275 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 2334 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || ||||| || || |||| | |||| ||| |||||| || || || || Sbjct 2335 TGGATTTTGGCCTTCACGTTCTCAATTGTGTC---ACTGGGCTCTACCTCCAGGGTGATG 2391 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || ||||||||||||| |||||| Sbjct 2392 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 2426 Score = 132 bits (146), Expect = 1e-25 Identities = 161/218 (74%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || ||||||||||| |||| | || | |||||| Sbjct 2671 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGACCATCT 2730 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| |||||||||||||| | | ||| |||||||| || Sbjct 2731 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 2790 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || ||||| || || |||| | |||| ||| |||||| || || || || Sbjct 2791 TGGATTTTGGCCTTCACGTTCTCAATTGTGTC---ACTGGGCTCTACCTCCAGGGTGATG 2847 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || |||||||| || |||||||| || | ||||||||| Sbjct 2848 GTCTTGCCCGTCAGGGTCTTCACAAAAATCTGCATTTT 2885 Score = 127 bits (140), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || ||||||||||| |||| | || | |||||| Sbjct 1759 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCT 1818 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| |||||||||||||| | | ||| || ||||| || Sbjct 1819 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 1878 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || ||||| || || |||| | |||| ||| |||||| || || || || Sbjct 1879 TGGATTTTGGCCTTCACGTTCTCAATTGTGTC---ACTGGGCTCTACCTCCAGGGTGATG 1935 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 1936 GTCTTGCCAGTCAGTGTCTTCACGAAGATCTGCAT 1970 Score = 127 bits (140), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || ||||||||||| |||| | || | |||||| Sbjct 1987 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCT 2046 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| |||||||||||||| | | ||| || ||||| || Sbjct 2047 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 2106 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || ||||| || || |||| | |||| ||| |||||| || || || || Sbjct 2107 TGGATTTTGGCCTTCACGTTCTCAATTGTGTC---ACTGGGCTCTACCTCCAGGGTGATG 2163 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 2164 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 2198 Score = 127 bits (140), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || ||||||||||| || | | || | |||||| Sbjct 2443 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGGCCATCT 2502 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| |||||||||||||| | | ||| || || || || Sbjct 2503 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCC 2562 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || ||||| || ||| |||| | |||| ||| |||||| || || || || Sbjct 2563 TGGATTTTGGCCTTCACATTCTCAATTGTGTC---ACTGGGCTCTACCTCCAGGGTGATG 2619 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || ||||||||||||| |||||| Sbjct 2620 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 2654 >seq152076 Length=2538501 Score = 129 bits (142), Expect = 1e-24 Identities = 160/218 (73%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || ||||||||||| || | | || | |||||| Sbjct 779008 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGACCATCT 779067 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| |||||||||||||| | | ||| |||||||| || Sbjct 779068 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 779127 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || ||||| || || |||| | |||| ||| |||||| || || || || Sbjct 779128 TGGATTTTGGCCTTCACGTTCTCAATTGTGTC---ACTGGGCTCTACCTCCAGGGTGATG 779184 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || |||||||| || |||||||| || | ||||||||| Sbjct 779185 GTCTTGCCCGTCAGGGTCTTCACAAAAATCTGCATTTT 779222 Score = 127 bits (140), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || || |||||||| |||| | || | |||||| Sbjct 778096 AGGACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCT 778155 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| |||||||||||||| | | ||| || ||||| || Sbjct 778156 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 778215 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || ||||| || || |||| | |||| ||| |||||| || || || || Sbjct 778216 TGGATTTTAGCCTTCACGTTCTCAATTGTGTC---ACTGGGCTCTACCTCCAGGGTGATG 778272 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || ||||||||||||| |||||| Sbjct 778273 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 778307 Score = 127 bits (140), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || ||||||||||| |||| | || | |||||| Sbjct 778324 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCT 778383 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| |||||||||||||| | | ||| || ||||| || Sbjct 778384 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 778443 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || ||||| || || |||| | |||| ||| |||||| || || || || Sbjct 778444 TGGATTTTAGCCTTCACGTTCTCAATTGTGTC---ACTGGGCTCTACCTCCAGGGTGATG 778500 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 778501 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 778535 Score = 127 bits (140), Expect = 5e-24 Identities = 158/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || || |||||||| |||| | || | |||||| Sbjct 778552 AGGACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCT 778611 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| |||||||||||||| | | ||| || || || || Sbjct 778612 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCC 778671 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || ||||| || ||| |||| | |||| ||| |||||| || || || || Sbjct 778672 TGGATTTTGGCCTTCACATTCTCAATTGTGTC---ACTGGGCTCTACCTCCAGGGTGATG 778728 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || ||||||||||||| |||||| Sbjct 778729 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 778763 Score = 123 bits (136), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || || |||||||| |||| | || | |||||| Sbjct 778780 AGGACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCT 778839 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| |||||||||||||| | | ||| || ||||| || Sbjct 778840 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 778899 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || ||||| || || |||| | |||| ||| |||||| || || || || Sbjct 778900 TGGATTTTGGCCTTCACGTTCTCAATTGTGTC---ACTGGGCTCTACCTCCAGGGTGATG 778956 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 778957 GTCTTGCCAGTCAGTGTCTTCACGAAGATCTGCAT 778991 >seq152203 Length=2432022 Score = 125 bits (138), Expect = 2e-23 Identities = 160/217 (74%), Gaps = 10/217 (5%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||| |||||||| || || ||||||||||| || | ||| || | ||||||| Sbjct 2337363 AGGACCAAATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCAGATAAGGTGCGCCCATCT 2337422 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||| ||||| | |||||||| |||| | ||| ||||| || | Sbjct 2337423 TCCAGCTGCTTT--CCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGT 2337480 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAA 152067 |||| || || ||||| |||| | | |||| ||| ||| ||||| || || | Sbjct 2337481 CTTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCCACTTCCAGGGTGA 2337537 Query 152068 TAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || ||||| || | |||||||| |||| |||||| Sbjct 2337538 TGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337574 Score = 114 bits (126), Expect = 3e-20 Identities = 163/226 (72%), Gaps = 10/226 (4%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | ||||| | || ||||| || || || ||||||||||| || | ||| || Sbjct 2337582 CTGAGGCGCAGGACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGATAAGGTG 2337641 Query 151944 CTCCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTC 152001 | ||||||||| || ||||| ||||| ||||| | |||||||| |||| | ||| | Sbjct 2337642 CGCCCATCTTCCAGCTGCTTT--CCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGC 2337699 Query 152002 CTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTT 152058 |||| || || || || || ||||| |||| | | |||| ||| ||| |||| Sbjct 2337700 CTTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCCACTT 2337756 Query 152059 CAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || ||||| || | |||||||| |||| |||||| Sbjct 2337757 CCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2337802 >seq105056 Length=1238 Score = 100 bits (110), Expect = 7e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| ||||| || ||||||||||| |||| | || | |||||| Sbjct 590 AGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGACCATCT 649 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| |||||||||||||| | | ||| |||||||| || Sbjct 650 TCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 709 Query 152013 TGAATTTT 152020 || ||||| Sbjct 710 TGGATTTT 717 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/215 (70%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || ||||| | ||| || ||||||||||| || | | ||| | |||||| Sbjct 364 AGGACAAGGTGCAGAGTGGTCTCCTTCTGGATGTTGTAGTCAGAGAGAGTGCGGCCATCT 423 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || ||||| ||||| ||||| | ||||| | | ||| || | ||| Sbjct 424 TCAATCTGCTTACCGGCAAAGATCAGCCT-TATTGGTCAGGTGGGATGCCCT-CTTGAAG 481 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 | ||||| || ||| |||| | ||| ||| |||||| || || || || Sbjct 482 GGGATTTTGGCCTTCACATTCTCAAGTGCGTC---ACTGGGCTCTACCTCCAGGGTGATG 538 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || ||||||||||||| |||||| Sbjct 539 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150861857567334