Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq152203 152 1e-31
seq171586 127 5e-24
seq152076 127 5e-24
>seq152203
Length=2432022
Score = 152 bits (168), Expect = 1e-31
Identities = 167/220 (76%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| ||||| |||||||| | || || ||||| |||||||||||||| || || |||
Sbjct 2338483 CAGATTTTTGTGAAAACCTTGACTGGTAAAACCATCACCCTCGAGGTAGA--GCCCAGTG 2338426
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||
Sbjct 2338425 ACACCATTGAGAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAGC 2338366
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | ||||| |||||||| ||||| |||||||| | || | | || || ||
Sbjct 2338365 AGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAATA 2338306
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|||| || ||||| || ||||| | ||| || | |||||
Sbjct 2338305 TCCAGAAGGAATCTACTCTGCACTTGGTTCTGCGCCTCAG 2338266
Score = 141 bits (156), Expect = 2e-28
Identities = 165/221 (75%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || | || || || || |||||||| || ||||| || |||
Sbjct 2337799 CAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGA--GCCCAGTG 2337742
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| |||||||||||||| ||||| ||||| ||||
Sbjct 2337741 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAGC 2337682
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | ||||| |||||||| ||||| |||||||| | || | | || || |||
Sbjct 2337681 AGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAACA 2337622
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||| || ||||| || ||||| | || || | ||||||
Sbjct 2337621 TCCAGAAGGAATCCACTCTGCACTTGGTCCTGCGCCTCAGA 2337581
Score = 140 bits (154), Expect = 8e-28
Identities = 164/220 (75%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || | || || || || |||||||| || ||||| || |||
Sbjct 2338255 CAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGA--GCCCAGTG 2338198
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| |||||||||||||| ||||| ||||| ||||
Sbjct 2338197 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAGC 2338138
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | ||||| |||||||| ||||| |||||||| | || | | || || ||
Sbjct 2338137 AGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAATA 2338078
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|||| || ||||| || ||||| | ||| || | |||||
Sbjct 2338077 TCCAGAAGGAATCTACTCTGCACTTGGTTCTGCGCCTCAG 2338038
Score = 136 bits (150), Expect = 9e-27
Identities = 153/203 (75%), Gaps = 4/203 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || | || || || || |||||||| || ||||| || |||
Sbjct 2337571 CAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGA--GCCCAGTG 2337514
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| || ||||||||||| ||||| ||||| ||||
Sbjct 2337513 ACACCATTGAGAACGTCAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCGGATCAGC 2337454
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | ||||| |||||||| ||||| |||||||| | || | | || || |||
Sbjct 2337453 AGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAACA 2337394
Query 178102 TCCAAAAAGAATCAACACTGCAT 178124
|||| || ||||| || ||||||
Sbjct 2337393 TCCAGAAGGAATCTACTCTGCAT 2337371
Score = 134 bits (148), Expect = 3e-26
Identities = 163/220 (74%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || || ||||| || | || || || || |||||||| || ||||| || |||
Sbjct 2338027 CAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAAGTGGA--GCCCAGTG 2337970
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
||||||| ||||||||||| ||||| |||||||||||||| ||||| ||||| ||||
Sbjct 2337969 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAAGAAGGCATCCCCCCGGATCAGC 2337910
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| || | ||||| |||||||| ||||| |||||||| | || | | || || ||
Sbjct 2337909 AGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGCGCACCTTATCTGACTACAATA 2337850
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
| || || ||||| || ||||| | ||| || | |||||
Sbjct 2337849 TTCAGAAGGAATCTACTCTGCACTTGGTTCTGCGCCTCAG 2337810
>seq171586
Length=8203
Score = 127 bits (140), Expect = 5e-24
Identities = 154/208 (74%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || || || || || || |||||||| ||||| || || |||
Sbjct 2651 CAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGA--GCCCAGTG 2594
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|||| || ||||| || || || || ||||||||||| || ||||| || |||||||
Sbjct 2593 ACACAATTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAGGGCATCCCCCCTGACCAGC 2534
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| ||||| || ||||| |||||||| | || || | || || |||
Sbjct 2533 AGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCTGACTACAACA 2474
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
|||| || || || || ||||| |||||
Sbjct 2473 TCCAGAAGGAGTCCACTCTGCACCTTGT 2446
>seq152076
Length=2538501
Score = 127 bits (140), Expect = 5e-24
Identities = 154/208 (74%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981
|| || |||||||| || || || || || || |||||||| ||||| || || |||
Sbjct 778760 CAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTGGAGGTAGA--GCCCAGTG 778703
Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041
|||| || ||||| || || || || ||||||||||| || ||||| || |||||||
Sbjct 778702 ACACAATTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAGGGCATCCCCCCCGACCAGC 778643
Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101
| | || ||||| ||||| || ||||| |||||||| | || || |||| || |||
Sbjct 778642 AGAGGCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACACTCTCCGACTACAACA 778583
Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129
| || || || || || ||||| |||||
Sbjct 778582 TTCAGAAGGAGTCCACTCTGCACCTTGT 778555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1200644263687876
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |