Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06- 17] 200,154 sequences; 1,995,607,322 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq152076 154 1e-32 seq171586 149 6e-31 seq105056 105 6e-18 seq152203 98.7 9e-16 >seq152076 Length=2538501 Score = 154 bits (170), Expect = 1e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || ||||| ||| ||||||||||||||| ||||||||||| ||||| | || || Sbjct 778099 ACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCA 778158 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || ||||| | ||| ||||| | || | || |||||||||| | Sbjct 778159 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 778218 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 ||||| ||||| | | ||||| || | ||| ||||||| || || || || Sbjct 778219 ATTTTAGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTG 778278 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| ||||| ||||| ||||||||| Sbjct 778279 CCCGTCAGGGTCTTCACGAAGATCTGCATG 778308 Score = 154 bits (170), Expect = 1e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || ||||| ||| ||||||||||||||| ||||||||||| ||||| | || || Sbjct 778555 ACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCA 778614 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || ||||| | ||| ||||| | ||| | || ||| |||||| | Sbjct 778615 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCCTGG 778674 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 ||||| ||||| | | ||||| || | ||| ||||||| || || || || Sbjct 778675 ATTTTGGCCTTCACATTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTG 778734 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| ||||| ||||| ||||||||| Sbjct 778735 CCCGTCAGGGTCTTCACGAAGATCTGCATG 778764 Score = 149 bits (164), Expect = 6e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || ||||| ||| ||||||||||||||| ||||||||||| ||||| | || || Sbjct 778783 ACAAGGTGCAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCA 778842 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || ||||| | ||| ||||| | || | || |||||||||| | Sbjct 778843 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 778902 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 ||||| ||||| | | ||||| || | ||| ||||||| || || || || Sbjct 778903 ATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTG 778962 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| ||||| ||||||||| Sbjct 778963 CCAGTCAGTGTCTTCACGAAGATCTGCATG 778992 Score = 145 bits (160), Expect = 7e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || ||||| ||| ||||||||| ||||| ||||||||||| ||||| | || || Sbjct 778327 ACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCA 778386 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || ||||| | ||| ||||| | || | || |||||||||| | Sbjct 778387 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 778446 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 ||||| ||||| | | ||||| || | ||| ||||||| || || || || Sbjct 778447 ATTTTAGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTG 778506 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| ||||| ||||||||| Sbjct 778507 CCAGTCAGGGTCTTCACGAAGATCTGCATG 778536 Score = 141 bits (156), Expect = 9e-29 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || |||| || || ||||| ||| ||||||||| ||||| ||||| ||||| ||||| Sbjct 779002 AGGCGTAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGA 779061 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||||||||| || ||||| | ||| ||||| | || | || ||| Sbjct 779062 CCATCTTCAAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCC 779121 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTT 41824 |||||| |||||| ||||| | | ||||| || | ||| ||||||| || Sbjct 779122 TTGTCCTGGATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTG 779181 Query 41825 ATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || || |||||||| ||||| || ||||||||||| || Sbjct 779182 ATGGTCTTGCCCGTCAGGGTCTTCACAAAAATCTGCATTTT 779222 >seq171586 Length=8203 Score = 149 bits (164), Expect = 6e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || ||||| ||| ||||||||| ||||| ||||||||||| ||||| | || || Sbjct 1762 ACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCA 1821 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || ||||| | ||| ||||| | ||| | || |||||||||| | Sbjct 1822 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGG 1881 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 ||||| ||||| | | ||||| || | ||| ||||||| || || || || Sbjct 1882 ATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTG 1941 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| ||||| ||||||||| Sbjct 1942 CCAGTCAGTGTCTTCACGAAGATCTGCATG 1971 Score = 149 bits (164), Expect = 6e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || ||||| ||| ||||||||| ||||| ||||||||||| ||||| | || || Sbjct 2218 ACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCA 2277 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || ||||| | ||| ||||| | || | || |||||||||| | Sbjct 2278 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 2337 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 ||||| ||||| | | ||||| || | ||| ||||||| || || || || Sbjct 2338 ATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTG 2397 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| ||||| ||||| ||||||||| Sbjct 2398 CCCGTCAGGGTCTTCACGAAGATCTGCATG 2427 Score = 145 bits (160), Expect = 7e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || ||||| ||| ||||||||| ||||| ||||||||||| ||||| | || || Sbjct 1990 ACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGGCCATCTTCA 2049 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || ||||| | ||| ||||| | || | || |||||||||| | Sbjct 2050 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 2109 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 ||||| ||||| | | ||||| || | ||| ||||||| || || || || Sbjct 2110 ATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTG 2169 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| ||||| ||||| ||||||||| Sbjct 2170 CCAGTCAGGGTCTTCACGAAGATCTGCATG 2199 Score = 145 bits (160), Expect = 7e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || ||||| ||| ||||||||| ||||| ||||| ||||| ||||| | || || Sbjct 2446 ACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGGCCATCTTCA 2505 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || ||||| | ||| ||||| | ||| | || ||| |||||| | Sbjct 2506 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGG 2565 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 ||||| ||||| | | ||||| || | ||| ||||||| || || || || Sbjct 2566 ATTTTGGCCTTCACATTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTG 2625 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| ||||| ||||| ||||||||| Sbjct 2626 CCCGTCAGGGTCTTCACGAAGATCTGCATG 2655 Score = 143 bits (158), Expect = 2e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || ||||| ||| ||||||||| ||||| ||||||||||| ||||| | || || Sbjct 2674 ACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGACCATCTTCA 2733 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || ||||| | ||| ||||| | || | || ||||||||| | Sbjct 2734 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGG 2793 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 ||||| ||||| | | ||||| || | ||| ||||||| || || || || Sbjct 2794 ATTTTGGCCTTCACGTTCTCAATTGTGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTG 2853 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||||| ||||| || ||||||||||| || Sbjct 2854 CCCGTCAGGGTCTTCACAAAAATCTGCATTTT 2885 >seq105056 Length=1238 Score = 105 bits (116), Expect = 6e-18 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || ||||| ||| ||||||||| ||||| ||||||||||| ||||| | || || Sbjct 593 ACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGTGTGCGACCATCTTCA 652 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || ||||| | ||| ||||| | || | || ||||||||| | Sbjct 653 AGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGG 712 Query 41774 ATTTTTTGCTTCA 41786 ||||| ||||| Sbjct 713 ATTTTGGCCTTCA 725 >seq152203 Length=2432022 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| ||||| || ||||||||||| || ||||| || | ||||||| | || || Sbjct 2337822 ACCAAGTGCAGAGTAGATTCCTTCTGAATATTGTAGTCAGATAAGGTGCGCCCATCTTCC 2337881 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| ||||| || |||| | ||| || |||| ||| | || || |||||| | Sbjct 2337882 AGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGG 2337941 Query 41774 ATTTTTTGCTTCAACGACG-ACACA---GTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 || || ||| |||| | || ||||| || | |||||| |||| || || || Sbjct 2337942 ATCTTGGCCTT----GACGTTCTCAATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGT 2337997 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || |||| ||||| || || |||||||| Sbjct 2337998 CTTGCCGGTCAAGGTCTTCACAAAGATCTGCAT 2338030 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| ||||| || |||||||| || || ||||| || | ||||||| | || || Sbjct 2338278 ACCAAGTGCAGAGTAGATTCCTTCTGGATATTGTAGTCAGATAAGGTGCGCCCATCTTCC 2338337 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| ||||| || |||| | ||| || |||| ||| | || || |||||| | Sbjct 2338338 AGCTGCTTTCCGGCAAAGATCAATCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCCTGG 2338397 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||| ||||| | || || |||||| Sbjct 2338398 ATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACCTCGAGGGTGATGGTTTTA 2338457 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| || || || ||||||||||| Sbjct 2338458 CCAGTCAAGGTTTTCACAAAAATCTGCAT 2338486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461147350064800