Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq257400 318 6e-82 seq253961 241 1e-58 seq262852 232 7e-56 seq260499 192 6e-44 seq253765 170 2e-37 seq249681 161 1e-34 seq253456 134 1e-26 seq48835 116 4e-21 seq256697 105 7e-18 seq262344 100 3e-16 >seq257400 Length=867372 Score = 318 bits (352), Expect = 6e-82 Identities = 622/910 (68%), Gaps = 17/910 (2%) Strand=Plus/Plus Query 16629 CATCCAATGAAAATGTGTTATCTTGTTTATGA--ACAACAC--CCATTCTTTGGTAATCG 16684 ||||||| | ||| | ||| ||| ||| | | ||| ||| |||| || || || ||| Sbjct 653791 CATCCAAAGTAAAGGAGTTTTCT-GTTGAAGTCGACATCACTCCCATCCTCTGATACTCG 653849 Query 16685 CTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCA 16744 | || | || || || ||||| || || || || || || ||||||||||| || ||| Sbjct 653850 CCTACTCTCTTCTCAAAGAAGTTTGTCTTCCCTTCCAGCGAAATATTCTCCATAAAGTCA 653909 Query 16745 AAAGGATT----AGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATC 16800 || ||||| | | ||||||| || || | |||||||| || | ||| || Sbjct 653910 AAGGGATTCTCCACT--CTGAAAACCTTGCTGA--AACCCAGTTCCAGCATAAGTCTGTC 653965 Query 16801 CGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGG 16860 || || ||||| || || || |||||| ||| |||||||| || || || || Sbjct 653966 TGCCACGAATTCAATGTACTGCTTCATTAAAGTGCAATTCATTCCAATCAGCTTGACAGG 654025 Query 16861 AAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAAC 16920 | || ||||| | || || ||||| ||| || | |||| || || Sbjct 654026 CAAGGCCTCCGTAAGGAACTCCTGTTCTATCCTAACAGCATTGATAATTATTTCTTTTAC 654085 Query 16921 TCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATG 16980 || | || || ||| | || || ||||| ||||| || || || || || || || Sbjct 654086 TCTCTGTTCCGAAGGTTTGTGAAGCAGGTGTTTGAACATGAGGCAGGCAAAGTCACAGTG 654145 Query 16981 TAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCG 17040 ||| ||||| |||||||| |||||||| || |||||||| | || |||||| |||||| Sbjct 654146 TAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAATCCTCG 654205 Query 17041 TTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGC 17100 |||||| | ||| || || | || || || ||||||||||| || || || || | ||| Sbjct 654206 TTTCTTAAGCCAGAAGATGGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCTACTGCTGC 654265 Query 17101 AAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCA 17160 ||| || | | ||||| | || || || ||||||| | |||||| | |||| Sbjct 654266 AAAAGCTACGACACGTTCTCCATAGGTAGCTTCTTTGTCCCCAATCCAACGCAAGGCCCA 654325 Query 17161 CTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTT--AAATAATTTCTCTTTT 17218 || || || | ||||| |||| ||||||||| || || || | | || ||| |||| Sbjct 654326 GTCTGCCTTCTTCTTTACGCAAGGCATCGTTTCAATTGCATTGAAGAGAAATTCCCTTTC 654385 Query 17219 TCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTC 17278 | || | || | || || || ||||| || || || ||||||||||| |||||||| Sbjct 654386 T-TTGGA-ATCTTTAATGTAAGTGTCGATAAGGAGACTATACATTTCGGAATGTATGTTT 654443 Query 17279 TCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAG 17338 |||||||| || || || || || || || |||||||| | || |||||||| | Sbjct 654444 TCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTA 654503 Query 17339 AATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATA 17398 ||||| ||| | | ||||| || || ||||| || || || || || || || | | | Sbjct 654504 AATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAGCTAGAACA 654563 Query 17399 TGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGAT 17458 || || |||||| | || || || | || | ||||| || | || ||||| Sbjct 654564 TGTGATATAAAATATCTCTCCTCAGGCTTCAGGGCTTCCCAGTGCTGAATGTCCTTGGAA 654623 Query 17459 ATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATA 17518 | |||||| || || | |||||||| |||| | || || |||||||| | ||||||| Sbjct 654624 AGATCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATACATCTGCCAAATA 654683 Query 17519 TCATTGTATT 17528 |||| ||||| Sbjct 654684 TCATGGTATT 654693 Score = 96.9 bits (106), Expect = 4e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| |||||||| |||||||| || |||||||| | || |||||| ||||||||||| Sbjct 657131 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAATCCTCGTTTCT 657190 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | | ||| || || | || || || ||||||||||| || || || || | |||||| | Sbjct 657191 TAAGCCAGAAGATGGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAAG 657250 Query 17106 C 17106 | Sbjct 657251 C 657251 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || ||||| || || || ||||||||||| |||||||| |||||||| || || Sbjct 658952 ATGTAAGTGTCGATAAGGAGACTATACATTTCGGAATGTATGTTTTCCATGGCAATTTGG 659011 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347 || || || || || |||||||| | || |||||||| | ||||||||| Sbjct 659012 AAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGTTCC 659065 >seq253961 Length=405542 Score = 241 bits (266), Expect = 1e-58 Identities = 415/599 (69%), Gaps = 13/599 (2%) Strand=Plus/Plus Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005 || ||||||||||| || || || || || || ||||| ||||| |||||||| |||||| Sbjct 310379 AGGTGTTTAAACATGAGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGT 310438 Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065 || || |||||||| | || |||||| ||||| |||||| | ||| || || | || Sbjct 310439 TCATTGGAAAATGTGAGGCCAGGCATCAATCCTCATTTCTTGAGCCAGAAGATGGATGCA 310498 Query 17066 AACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTAC 17125 || || ||||||||||| || || || || | |||||| || | | |||| | || Sbjct 310499 AAAGAACCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGGCTACAACATGTTCTCCATAG 310558 Query 17126 GTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCC 17185 || | |||||||| | |||||| | | |||| || || || | ||||| |||| | Sbjct 310559 GTAACTTCTTTGTTCCCAATCCAATGCAAGGCCCAGTCTGCCTTCTTCTTTACGCAAGGC 310618 Query 17186 ATCGTTTCTATGGCCTT--AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTAT 17243 || ||||| || || || | | || ||| |||| | || | ||| | || || || | Sbjct 310619 ATTGTTTCAATTGCATTGAAGAGAAATTCCCTTTCT-TTGGA-ATCGTTAATGTAAGTGT 310676 Query 17244 CGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAA 17303 ||| || || || |||||||| || || ||||| |||||||| || || || || || | Sbjct 310677 TGATAAGGAGACTATACATTTCAGAATGCATGTTTTCCATGGCAATTTGGAAGCCATAGA 310736 Query 17304 AGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCA 17363 |||| | |||||||| || |||||||| | ||| | ||| | | |||| || | Sbjct 310737 AGCAGCAGGCTTCCGTAATCTGAACTTCTTGGCTAAATAGCTCCACCAAGTTTTGATTTA 310796 Query 17364 CGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCG 17423 | ||||| || || || || || | || | | ||| || |||| | | || || | Sbjct 310797 CTATGCCATCACTTGCTGCAAAGACAGCTAGAACATGTGATATAAAATCTCTCTCCTCAG 310856 Query 17424 GTGTAAGAACGCGC----CAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTC 17479 | | || || |||| || | || ||||| | |||||| || || | ||| Sbjct 310857 GCTT-----CGGGCTTCACAGTGCTGAATGTCCTTGGAAAGATCCACCTCCTCAGCTGTC 310911 Query 17480 CAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 ||||| || | | || || |||||||| | ||||||||||| ||||| ||| || || Sbjct 310912 CAAAAGGAAGACTCAGCTTTCTTATACATCTGCCAAATATCATGGTATTTTATAGGAAA 310970 >seq262852 Length=263465 Score = 232 bits (256), Expect = 7e-56 Identities = 603/910 (66%), Gaps = 17/910 (2%) Strand=Plus/Plus Query 16629 CATCCAATGAAAATGTGTTATCTTGTTTA---TGAACA-ACACCCATTCTTTGGTAATCG 16684 ||||||| | ||| | ||| ||| ||| | ||| | || ||||| || || || ||| Sbjct 12692 CATCCAAGGTAAAGGAGTTTTCT-GTTGAACTTGACCTCACTCCCATCCTCTGATACTCG 12750 Query 16685 CTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCA 16744 | || | || || || || || || || || || || || || |||||||| || ||| Sbjct 12751 CCTACTCTCTTCTCAAAGAAATTGGTCTTCCCTTCCAGTGAAATTTTCTCCATAAAGTCA 12810 Query 16745 AAAGGATT----AGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATC 16800 || ||||| | | ||||||| || || | |||||||| || | ||| || Sbjct 12811 AAGGGATTCTCCACT--CTGAAAACCTTGCTGA--AACCCAGTTCCAGCATAAGTCTGTC 12866 Query 16801 CGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGG 16860 || | | ||| || || || |||||| || |||||||| || || || || Sbjct 12867 TGCCATGAGTTCAATGTACTGCTTCATTAAAGTACAATTCATTCCAATCAGCTTGACAGG 12926 Query 16861 AAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAAC 16920 | || || || | || || ||||| ||| | || |||| || || Sbjct 12927 CAAGGCCTCTGTAAGGAACTCCTGTTCTATCCTAACAGATTTGATAATTATTTCTTTTAC 12986 Query 16921 TCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATG 16980 || || || | ||| | || || ||||| || || || || || || ||||| || Sbjct 12987 TCTCTCTTCCAAAGGTTTGTGAAGCAGGTGTTTGAATATGAGGCAGGCAAAGTCGCAGTG 13046 Query 16981 TAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCG 17040 ||| ||||| |||||||| |||||||| || | |||||| | || || ||| |||| | Sbjct 13047 TAAACCCTCATCTCTGCTAATAAGTTCATTGGCAAATGTGAGGCCAGGTATCAGTCCTTG 13106 Query 17041 TTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGC 17100 |||||| | ||| || || | | || || ||||||||||| || || || || | ||| Sbjct 13107 TTTCTTGAGCCAGAAGATGGATCCAAAAGAGCCAGAAAAGAAGATTCCTTCTACTGCTGC 13166 Query 17101 AAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCA 17160 ||| || | || | ||| | || || || |||||||| | |||||| | | |||| Sbjct 13167 AAAGGCTACTACACATTCTCCATAGGTAGCTTCTTTGTTCCCAATCCAATGCAAGGCCCA 13226 Query 17161 CTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTT--AAATAATTTCTCTTTT 17218 || || || | ||||| ||| |||||||| || || || | | || ||| |||| Sbjct 13227 ATCTGCCTTCTTCTTTACACAAGGTATCGTTTCAATTGCATTGAAGAGAAATTCCCTTTC 13286 Query 17219 TCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTC 17278 | || | || | || || || ||||| ||||| || |||||||| || |||||||| Sbjct 13287 T-TTGGA-ATCTTTAATGTAAGTGTCGATAAGTAGACTATACATTTCCGAATGTATGTTT 13344 Query 17279 TCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAG 17338 ||||||| || || || || || ||||| | |||||||| || ||||||| | Sbjct 13345 TCCATGGGAATTTGGAAGCCATAGAAGCAGCAGGCTTCCGTAATCTGAACTTTTTGGCTA 13404 Query 17339 AATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATA 17398 |||| | | | | ||||| || || |||| || || || || | || || | | | Sbjct 13405 AATCACTGCACCAAGTTTTCATTTACTTTGCCATCACTTGCTGCACAGAAAGCTAGAACA 13464 Query 17399 TGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGAT 17458 || || |||||| | || || | | || | ||||| || | || ||||| Sbjct 13465 TGTGGTATAAAATATCTCTCCTCACGCTTCAGGGCTTCCCAGTGCTGAATGTCCTTGGAA 13524 Query 17459 ATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATA 17518 | |||||| || || | |||||||| ||| | || || |||| ||| |||||| || Sbjct 13525 AGATCCACCTCCTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATGCATCTTCCAAGTA 13584 Query 17519 TCATTGTATT 17528 || | ||||| Sbjct 13585 TCGTGGTATT 13594 >seq260499 Length=1869696 Score = 192 bits (212), Expect = 6e-44 Identities = 554/841 (66%), Gaps = 20/841 (2%) Strand=Plus/Minus Query 16694 TTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTA 16753 || || |||||||| || || || || || || ||||||||||| || ||||| ||||| Sbjct 726028 TTCTCAAAAAAGTTTGTATTTCCTTCCAGTGAAATATTCTCCATAAAGTCAAACGGATTC 725969 Query 16754 --GTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATT 16811 | ||||||| || | | |||||||| || | |||||| || ||||| | Sbjct 725968 TCGACCCTGAAAACCTTGCTAA--AACCCAGTTCCAGCATAAGTCTATCTGCCACAAACT 725911 Query 16812 CTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCG 16871 | || || || |||||| ||| |||||||| | || || || |||| Sbjct 725910 CAATGTACTGCTTCATTAAAGTGCAATTCATTCCATTCAGCTTCACAGGC----CTTCAT 725855 Query 16872 TCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGG 16931 || || | | ||||| ||| || | |||| || ||| | || | Sbjct 725854 AAGGAACTCCT-GTTCTATTCTAACAGCATTGATAATTATTTCTTTTACTGTCTGTTCTG 725796 Query 16932 ACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGT 16991 | ||| | || || ||||| ||||| || || || || | ||| ||||| ||||| | Sbjct 725795 AAGGTTTGTGAAGCAGGTGTTTGAACATGAGGCAGGCAAAGTTGCAGTGTAAACCCTCAT 725736 Query 16992 CTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACC 17051 ||||||| ||| |||| || |||||||| | || |||||| ||||| |||||| | | Sbjct 725735 CTCTGCTAATAGGTTCATTGGAAAATGTGAGGCCAGGCATCAATCCTCTTTTCTTGAGAC 725676 Query 17052 AAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTA 17111 | || |||| || || || ||||||||||| || || || || | |||||| || | | Sbjct 725675 AGAAGATCGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGGCTACAA 725616 Query 17112 ATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTT 17171 ||||| | || || || |||||| | || || | | |||| || || || Sbjct 725615 CACGTTCTCCATAGGTAGCTGCTTTGTCCCCAACCCCATGCAAACCCCAGTCTGCCTT-- 725558 Query 17172 GCTTTATGCAATCCATCGTTTCTATGGC-CT-TAAATAATTTCTCTTTTTCCTGTAGGTC 17229 ||||| ||| ||| ||||| || || || ||| || ||| |||| | || | || Sbjct 725557 -CTTTACACAAAGCATTGTTTCAATTGCACTGAAAAGAAATTCCCTTTCT-TTGGA-ATC 725501 Query 17230 GATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTAT 17289 | || || || || || || || || |||||||| || | |||||| |||||||| || Sbjct 725500 TTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATATATGTTTTCCATGGCAAT 725441 Query 17290 CTGAAATCCGTAAAAGCA--TCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCC 17347 || || || || ||||| ||||||| || |||||||| | ||||| ||| Sbjct 725440 TTGGAAGCCATAGAAGCAGTGTGGGCTTCTAAAATCTGAACTTCTTGGCTAAATCGCTCC 725381 Query 17348 GCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATG 17407 | || ||||| || || ||| | || || || | | || ||||| | | | | Sbjct 725380 ACCAGGTTTTCATTTACTATGACATCACTTGCTGAACAGAAAGCCAAAACAAGTGATACA 725321 Query 17408 AAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACT 17467 |||||| | || || | || | ||| | || | || ||||| | |||||| Sbjct 725320 AAATATCTCTCCGTAGGCTTCAGGGCTTCCCACTGCTCAATGTCCTTGGAAAGATCCACC 725261 Query 17468 TCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTAT 17527 || || | |||||||| |||| | || || |||||||| | |||| ||||| |||| Sbjct 725260 TCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATACATCTGCCAA--ATCATGGTAT 725203 Query 17528 T 17528 | Sbjct 725202 T 725202 >seq253765 Length=547980 Score = 170 bits (188), Expect = 2e-37 Identities = 547/840 (65%), Gaps = 23/840 (3%) Strand=Plus/Minus Query 16703 AAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAG-TAG-CTG 16760 ||||| || || || ||||| || |||||||||| || ||||| ||||| || ||| Sbjct 64261 AAGTTGGTCTTCCCTTCTAGCAATGTATTCTCCATAAAGTCAAATGGATTCTCTACTCTG 64202 Query 16761 AAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATT 16820 |||| || || | |||||| | || | | | || || | ||||| || || | Sbjct 64201 AAAACCTTGCTGA--AACCCAGTCCCAGCATAATTTTGTCAGCCATGAATTCAATGTACT 64144 Query 16821 GGCACATTAATTCGCAGTTCATTCCTATAAGACGT-ACCGGAAGAGCTTCCGTCAAAAAT 16879 | |||||| ||| |||||||| || | || | || || | || ||| | | ||| Sbjct 64143 GCTTCATTAAAGTGCAATTCATTCCAATCA-ACTTCACAGGCAAGGCCTCCATAAGGAAT 64085 Query 16880 CGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTA 16939 | | ||||| ||| | | |||| || ||||| | || || ||| | Sbjct 64084 CCCTATTCTATCCTAACAGTATTGATAATTATTTCTTTAACTCTCTGTTCTGAAGGTTTG 64025 Query 16940 TGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTG 16999 || | | ||| ||||| || || || || | | | ||||| ||||| ||||||| Sbjct 64024 TGAAGCAAGTATTTGAACATGAGGCAGGCAAAGTTGTAGTGTAAGCCCTCATCTCTGCCA 63965 Query 17000 ATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATC 17059 |||| ||| | |||||||| | || |||||| | ||| |||||| | ||| || || Sbjct 63964 ATAAATTCACTGGAAAATGTGAGGCCTGGCATCAATTCTCATTTCTTGAGCCAGAAGATT 63905 Query 17060 GCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCG 17119 | || || || || |||||||| || || || || | |||||| || || | ||||| Sbjct 63904 GACGCAAAAGATCCTGAAAAGAAGATTCCTTCTACTGCTGCAAAGGCTATGACACGTTCT 63845 Query 17120 GCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATG 17179 | || || || ||||||| |||| | | | ||||| || || || ||||||| Sbjct 63844 ACATAGGTAGCTTCTTTGTCCTCAATCTAATGCAAGACCCAGTCTGCCTTCCTCTTTATG 63785 Query 17180 CAATCCATCGTTTCTATGGC--CTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATAT 17237 ||| || ||||| || | | | | || ||| |||||| || | || | || | Sbjct 63784 CAAG--AT-GTTTCAATTACACCGAAGAGAAATTCCCTTTTT---GTGGATCTTTAATGT 63731 Query 17238 ACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATC 17297 | || | | | || || ||| |||||| ||| |||||||| || ||||| || || || | Sbjct 63730 AAGTGTTGTTAAGGAGACTGCACATTTTGGAATGTATGTTTTCTATGGCAATTTGGAAGC 63671 Query 17298 CGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTT 17357 | | || || | |||||| | || ||||| || | ||| | ||| | |||| Sbjct 63670 CACAGAAACAGCAGGCTTCTGTAATCTGAACCTCATGGCTTAATGGCTCCATCAAGTTTT 63611 Query 17358 CGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTT 17417 | || || ||||| || | | || || | |||| ||||| || |||||| ||| Sbjct 63610 CATTTACTATGCCATCATTTTCTGCAAAGCAAGCCAGGATATGTGATATAAAATATCTTT 63551 Query 17418 CGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGG 17477 | || || | || | ||||| || | || ||||| ||| || || || | | Sbjct 63550 CTTCAGGCTTCAGGGCTTCCCAGTACTGAATGTCCTTGGAACGATCTACCTCCTCAGCTG 63491 Query 17478 TCCAAAAACTAGCCACTGCCTTTTTATA---------CATATTCCAAATATCATTGTATT 17528 ||||||| ||||| | || || ||| | ||| | ||||||||||| ||||| Sbjct 63490 TCCAAAAGGTAGCCTCAGCTTTCTTAAATATTTGGCTCATCTGCCAAATATCATGGTATT 63431 >seq249681 Length=338998 Score = 161 bits (178), Expect = 1e-34 Identities = 399/597 (67%), Gaps = 10/597 (2%) Strand=Plus/Minus Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005 || ||||| ||||| || || || || || || ||||||||||| |||||||| | |||| Sbjct 145752 AGGTGTTTGAACATTAGGCAAGCAAAGTCACAGTGTAATCCCTCATCTCTGCTAACAAGT 145693 Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065 || || |||||||| || || || | | |||| |||||| | || || | | || Sbjct 145692 TCATTGGAAAATGTGAAGCCAGGAAACAATCCTTGTTTCTCGAGTCAGAAGACTGACGCA 145633 Query 17066 AACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTC-GGCGTA 17124 || || |||| |||||| || || || || | |||||| || | || |||| | | Sbjct 145632 AAAGAGCCAGTAAAGAAGATTCCTTCTACTGCTGCAAAGGCTACATAT-GTTCTTCCACA 145574 Query 17125 CGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATC 17184 || | |||| || | |||||| | | |||| || || || ||||| | | Sbjct 145573 GGTAACTTCTTGGTCCCCAATCCAATGCAAGGCCCAGTCTGCCTT---CTTTACACCAAG 145517 Query 17185 CATCGTTTCTATGGCCTT--AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTA 17242 ||| |||| | || || | | || ||| |||| | || | || | || || | Sbjct 145516 CATTATTTCAGTTGCATTGAAGAGAAATTCCCTTTCT-TTGGA-ATCTTTAATGTAAATG 145459 Query 17243 TCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCC-GTA 17301 || || || || || |||| ||| || |||||||| || ||||| || || || || | Sbjct 145458 TCAATAAGGAGACTATACAATTCAGAATGTATGTTTTCTATGGCAATTTGGAAGCCAACA 145399 Query 17302 AAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTT 17361 || || ||||||| | || |||||||| | ||| | ||| | || ||| || Sbjct 145398 GAAACAGTGGGCTTCTGTGATCTGAACTTCTTGGCTAAATTGCTCCATCAAATATTCATT 145339 Query 17362 CACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTC 17421 || ||||| || || || || || || |||| | ||| || |||||| | || || Sbjct 145338 CATTATGCCATCACTTGCTGCAAAGAAAGCCAGAACATGTGACATAAAATATCTCTCCTC 145279 Query 17422 CGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCA 17481 || | ||| | ||||| || | |||||| || | |||||| | || | ||||| Sbjct 145278 AGGCCTCAGAGCTTTCCAGTGCTGTTTATCTTTAGAAAGATCCACCTTCTCAGCTGTCCA 145219 Query 17482 AAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 ||| |||| | || || |||||||| | |||||||||| || || ||| || || Sbjct 145218 AAAGGAAGCCTCGGCTTTCTTATACATCTGCCAAATATCAAAGTTTTCTATAGGAAA 145162 >seq253456 Length=16905 Score = 134 bits (148), Expect = 1e-26 Identities = 382/581 (66%), Gaps = 17/581 (3%) Strand=Plus/Minus Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005 || ||||| | ||| || || || || | |||| || | | ||| |||||||| |||||| Sbjct 6727 AGGTGTTTGAGCATGAGGCAAGCAAAGTTGCAACGTCAACTCTCATCTCTGCTAATAAGT 6668 Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065 | | |||||||| | || |||||| ||||||||||| | ||| || || | || Sbjct 6667 CCACTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTGAAGCCAGAAGATAGATGCA 6608 Query 17066 AACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTAC 17125 || || ||||||||||| | || || || |||||||| || | | | ||| || | Sbjct 6607 AAGGAGCCAGAAAAGAAGGTTCCTTCTACTGATGCAAAGGCTACGACACCTTCTCCGGAG 6548 Query 17126 GTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCC 17185 || ||||||||| | || ||| | ||||| | || ||| |||| ||| | Sbjct 6547 GTTACGTCTTTGTCCCCAAACCAACGCAAGGCCCACCCTGCCTTT---TTTACACAAGGC 6491 Query 17186 ATCGTTTCTATGGCCTTAAA--TAATTTCTCTTTTTCCTGTAGGTCGATT--ATATACGT 17241 |||||||| || || || || || ||| |||| | | || | || || | || Sbjct 6490 ATCGTTTCAATTGCATTGAAGGGAAATTCCCTTTCT----TTGGACTCTTCAGTAAAAGT 6435 Query 17242 ATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTA 17301 || || | || || |||||||| || | |||||| |||||||| || || || || | Sbjct 6434 GTCAATAACGAGACTATACATTTCAGAATATATGTTTTCCATGGCAATTTGGAAGCCACA 6375 Query 17302 AAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTT 17361 || | ||||||| | || |||||||| | |||| ||| | | |||||| | Sbjct 6374 CAAATAGCGGGCTTTTGTAATCTGAACTTCTTGGCTAAATCACTCCACCAAATTTTCACT 6315 Query 17362 CACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTC 17421 | | ||| || || | || || || |||| | ||| | || || || | || || Sbjct 6314 TATTAAGCCATCACTTCCTGCAAAGAAAGCCAGAACATG--TGATACAAAATCTCTC-TC 6258 Query 17422 C---GGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGT 17478 | || | || | ||||| || | || ||||| | ||||| || || | || Sbjct 6257 CAAAGGCTTCAGGGCTTCCCAGTGCTGAATGTCCTTGGAAAGTTCCACCTCCTCAGCTGT 6198 Query 17479 CCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATAT 17519 | |||| |||| | | || ||| |||| | |||||||| Sbjct 6197 CAAAAAGGAAGCCTCACCTTTCTTACACATTTGCCAAATAT 6157 >seq48835 Length=336802 Score = 116 bits (128), Expect = 4e-21 Identities = 444/688 (65%), Gaps = 12/688 (2%) Strand=Plus/Plus Query 16835 CAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACA 16894 || |||||||| || || | || || | ||||| || ||||| ||||| || || Sbjct 232212 CAATTCATTCCAATGAGGCCAACTGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATCTCA 232271 Query 16895 ACCGCTTCCTTAATAATACTAGCAACTCGTTCCT-CGGACGGTGTATGTT-TAAGATGTT 16952 || || | |||| || || | || || || | | ||| ||| | |||| | || Sbjct 232272 ACAGCATTAATAATGAT-CTCCCTGATCCTTTCTTCCAAAGGTTTATTTACTAAG-TATT 232329 Query 16953 TAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAG 17012 ||||||||| || | || || || || | || || ||||||||||| ||||| | | Sbjct 232330 GAAACATCAGGCAAACAAAGTCACAGTGAAGCCCTTCATCTCTGCTGATGAGTTCACTGG 232389 Query 17013 AAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACC 17072 |||| || | || ||||| |||| ||||||||||| ||||| || || || || | Sbjct 232390 AAAAAGTGAGTCCAGGCATAAGACCTCTGTTCTTTAACCAGAATATAGCAGCAAAAGATC 232449 Query 17073 CAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGT 17132 | || || || ||||| || | | ||||| || | | | ||| | | || | Sbjct 232450 CTGAGAAAAAAATACCTTCTAGAGCAGCAAAGGCCACCACCCTTTCCCCAAAAGTAG--- 232506 Query 17133 CTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTT 17192 ||| || | || | |||| || ||||||| ||| | | | ||| |||| Sbjct 232507 ATTTTCTA-TCTGCTATCACAAGGCCCAATCTGCTTTTTTCTTAACGTATGGCATTGTTT 232565 Query 17193 CTATGGCCTTAAATA--ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAG 17250 |||| || ||||||| | ||| ||||| || | || | || || || || || || Sbjct 232566 CTATTGCATTAAATAAGAATTCCCTTTT--CTTGGGATCTCTGATGTAAGTGTCTATTAG 232623 Query 17251 TAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCG 17310 | || ||||| || ||||| | |||| ||| || ||||| || || || || || Sbjct 232624 CAAACTATACATCTCTGAGTGAACATTCTGGATGAGAATTTGAAAACCATAGAAACAGCG 232683 Query 17311 GGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCC 17370 || || | | || | ||| | ||| || ||| | | ||||| || || | || Sbjct 232684 AGCCTCTGAGACCTGTAGCTCCTGGCTGAAGCGCTCCACCAAGTTTTCATTTACAGTTCC 232743 Query 17371 GTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAG 17430 || || || || ||||| || || | || || ||||| || || || | | |||| Sbjct 232744 ATCACTGGCTGCAAAAAAGGCTAAGACGTGAGAGATAAAATACTTCTCTTCTGATTTAAG 232803 Query 17431 AACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGC 17490 | ||||| | ||| || |||| || | ||||| | ||||| || || Sbjct 232804 CTTGTTCCAGTGAGGGAGATCCTTTGATAAGTCAGCCTCTTCTGCTGTCCAGAAGGATGC 232863 Query 17491 CACTGCCTTTTTATACATATTCCAAATA 17518 | ||||| ||||||||| ||||||||| Sbjct 232864 CTGTGCCTGTTTATACATTTTCCAAATA 232891 >seq256697 Length=950989 Score = 105 bits (116), Expect = 7e-18 Identities = 377/576 (65%), Gaps = 24/576 (4%) Strand=Plus/Minus Query 16946 AGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGT 17005 || ||||| |||| || || | || || || |||| ||||| |||||||| || Sbjct 172991 AGGTGTTTGAACACGAGGCAGGTAAAGTCACAGGGTAAACCCTCATCTCTGCTAAT---- 172936 Query 17006 TCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCG 17065 || || |||||||| | || ||| | ||||| |||||| | | | || |||| || Sbjct 172935 TCTTTGGAAAATGTGAGGCCAGGCGTTAATCCTCATTTCTTGAGCAAGAAGATCGATGCA 172876 Query 17066 AACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTAC 17125 | || ||||||||||| | | | | | |||||| || | | ||||| |||| Sbjct 172875 GAAGAGCCAGAAAAGAAGA---CTCCTGCTGCTGCAAAGGCTACGACACGTTCTCCGTAG 172819 Query 17126 GTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCC 17185 || | | ||||| | | |||| | | ||||| || || || ||||| |||| | Sbjct 172818 GTAACTTGTTTGTCCCCAGTCCAGTACAAGACCCAGTCTGCCTT---CTTTACGCAAAGC 172762 Query 17186 ATCGTTTCTATGGCCTT--AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTAT 17243 || ||||| || || | | || ||| |||| | || | ||| ||| | || | Sbjct 172761 ATTGTTTCAGCTGCATTGAAGACAAATTCCCTTTCT-TTGGA-GTC-TTTA---ATGTGT 172708 Query 17244 CGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTA-TCTGAAATCCGTAA 17302 |||| || | |||| ||||| ||||||| |||| |||||||| | | || || ||||| Sbjct 172707 CGATAAGGTGACTGTGCATTTTGGAGTGTTTGTTTTCCATGGCAATTTTGGAAGCCGTAG 172648 Query 17303 AAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTC 17362 || || | |||||| | || |||| ||| | ||||| ||| | |||| ||| Sbjct 172647 AAACAGCAGGCTTCTGTAATCTGAATTTCTTGGCTAAATCGCTCCATCAAGTTTTTGTTT 172588 Query 17363 ACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCC 17422 || | ||| || || || || | | |||| ||||| || ||| || | || || Sbjct 172587 ACTAAGCCATCACTTGCTGC--AGAGAGCCAGAATATGTGATATAAAACATCTGTCCTCA 172530 Query 17423 GGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAA 17482 || | | || | || || || || ||||| | |||||| | || | |||| | Sbjct 172529 GGCTTCTGGACTC-CCGGTGCTGAGTGTCCTTGGA-AAATCCACCGCCTCAGCTGTCC-A 172473 Query 17483 AAACTAGCCACTGCCTTTTTATACATATTCCAAATA 17518 || |||| | || || |||||||| | ||| ||| Sbjct 172472 AAGGAAGCCTCAGCTTTCTTATACATCTGCCAGATA 172437 >seq262344 Length=1377916 Score = 100 bits (110), Expect = 3e-16 Identities = 237/354 (67%), Gaps = 7/354 (2%) Strand=Plus/Minus Query 16980 GTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTC 17039 |||| ||||| | |||||| | |||||| || | |||||| | || |||||| ||||| Sbjct 569730 GTAAACCCTCATTTCTGCTAACAAGTTCATTGGGAAATGTGAGGCCAGGCATCAGTCCTC 569671 Query 17040 GTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATG 17099 |||||| | ||| || |||| || | || ||||||||||| || || || | | || Sbjct 569670 ATTTCTTGAGCCAGAACATCGATGCAA--GAGCCAGAAAAGAAGATTCCTTCTGCTGCTG 569613 Query 17100 CAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCC 17159 |||| || | | ||||| | | || || |||||| | ||||||| | ||| Sbjct 569612 CAAAGGCTAAGACACGTTCTCCAGAGGTAGCTCCTTTGTCTCCAATCCATCGCAAGGCCC 569553 Query 17160 ACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA--ATTTCTCTTT 17217 | || || | ||||| ||| || ||||| || || ||||| | | ||| |||| Sbjct 569552 AGTCTGCCGCCTTCTTTACACAAGGCAGCGTTTGAATTGCATTAAAGAGAAATTCCCTTT 569493 Query 17218 TTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTT 17277 | | | || | || | | | ||| || || || ||||||||||| |||||||| Sbjct 569492 CTTTGGAA--TCTTTAATGTGAATGTTGATAAGGAGACTATACATTTCGGAATGTATGTT 569435 Query 17278 CTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331 || || | || || | || | || || | |||||| | || ||| |||| Sbjct 569434 TTCTGTGACAATTTGGAGCCCACAGAAACAAC-GGCTTCTGTAATCTGAGCTTC 569382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515804809497120