Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30]
269,084 sequences; 3,286,013,499 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq263927 104 4e-17
>seq263927
Length=651112
Score = 104 bits (114), Expect = 4e-17
Identities = 105/133 (79%), Gaps = 4/133 (3%)
Strand=Plus/Minus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||||||||| ||| | ||||||||||| ||||| ||||||||| | || |||||
Sbjct 446268 GCATTTTTTGGAGCCCAGATTAATTCTTTTATACATGTGATTATGTACTCATACTATGGG 446209
Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174
| | || | ||| || ||| ||||| |||||||| ||||||||||| || || || |
Sbjct 446208 TTAACTGCATTTGG-CCCATGGATTCAG-AAGTATCTCTGGTGGAAACGATACCTGACCA 446151
Query 52175 TAATGCAGTTGGT 52187
| ||||| ||||
Sbjct 446150 TGCTGCAGCTGGT 446138
Score = 87.8 bits (96), Expect = 3e-12
Identities = 122/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 51885 GATAGCCAGAGCATTATGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGT 51944
|||||| ||| | |||| ||||| | |||| ||||| | || || ||||| || ||
Sbjct 447761 GATAGCTGCAGCTCTGTGGTGGTACTTTGTATCTAAAGGAGTTGAGTATTTGGACACAGT 447702
Query 51945 ATTTTTCATACTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTT 52004
||||| || || ||||| ||| || || || ||| || || ||||||||||| |
Sbjct 447701 GTTTTTTATCCTAAGGAAGAAAAACAACCAAGTGTCTTTCCTTCATGTATATCATCACTG 447642
Query 52005 TACTATGTTTACTCTAGGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055
|| |||||||| | | ||||| || ||||| ||| |||| || || ||
Sbjct 447641 CACAATGTTTACATTGTGGTGGATTGGAATTAAGTGGGTTGCAGGGGGACA 447591
Score = 86.0 bits (94), Expect = 1e-11
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 52189 CAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTTTCCA 52248
||||||||| | | || || || || || |||| |||| | |||||||| || ||
Sbjct 443863 CAGTTCCATGTGACCATTGGGCACACAGCATTGTCTCTTTATACTGATTGCCCCTTCCCC 443804
Query 52249 AAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGGTAAC 52308
|||||||| || ||| | | ||| |||| | || ||||||||||| || ||| |||
Sbjct 443803 AAATGGATGCACTGGGCTCTGATTGCCTATGCAATCAGTTTCATATTTCTCTTTCTTAAT 443744
Query 52309 TTCTATTTTAGAACATACAA 52328
|||||| || | ||||||||
Sbjct 443743 TTCTATGTTCGGACATACAA 443724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 920091581403360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |