Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq260417 91.5 1e-13 >seq260417 Length=1194950 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| ||||||||||| || ||||| || ||| |||| || || | || Sbjct 431704 ATGCAGATCTTTGTGAAAACCTTAACGGGTAAAACTATCACCCTCGAGGTGGAGCCCAGT 431763 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | ||| |||| || || | || |||||| | || ||||||| Sbjct 431764 GACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCTGACCAG 431823 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | || || | ||| || || || ||||||||| | || || ||| |||| | Sbjct 431824 CAGAGATTGATCTTTGCCGGGAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAAC 431883 Query 25012 ATACAGAAAGAGGCCACGCTTCA 25034 || ||||| ||| |||| || || Sbjct 431884 ATCCAGAAGGAGTCCACCCTGCA 431906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416932188241280