Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq205975 201 1e-46 seq251882 170 2e-37 seq257211 127 2e-24 seq261394 120 3e-22 seq261591 118 9e-22 seq258222 118 9e-22 seq250505 118 9e-22 seq261392 107 2e-18 seq263908 105 6e-18 seq257204 105 6e-18 seq14725 104 2e-17 seq76734 102 7e-17 seq257026 100 2e-16 seq262877 98.7 8e-16 seq258550 98.7 8e-16 seq260770 91.5 1e-13 seq252671 91.5 1e-13 seq181268 89.7 4e-13 seq253489 86.0 5e-12 seq252863 86.0 5e-12 seq238652 84.2 2e-11 >seq205975 Length=138355 Score = 201 bits (222), Expect = 1e-46 Identities = 455/676 (67%), Gaps = 11/676 (2%) Strand=Plus/Minus Query 20911 GCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGT 20970 ||||||||| ||| | |||| ||| || ||||| || || || ||||| || | Sbjct 52411 GCAGCTGAATTTTCAGTGCTTCAATGTGATTCCGGTAAATTTGTGCATCTCCCAAAGTAT 52352 Query 20971 GCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGT 21030 |||||||||| || || |||||||| ||| ||| ||||||| | | | ||||||| Sbjct 52351 GCACAAAGTCACCTGGCTTCAGGCCCCTGATGTGTGCGATCATGCAGTTGCGCAGGGCGT 52292 Query 21031 AGCTGGCGATGT--TAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTG 21088 | ||||| ||| | || || | |||||||||||||| | ||| |||||||||||| Sbjct 52291 GGTTGGCGGTGTGTTGAAAGGCAGGCCGAGGCCCATGTCTCCTGACTGCTGGTACAGCTG 52232 Query 21089 GCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGC 21148 ||| || ||||| | | || | | ||||| || || |||| || || | || Sbjct 52231 GCACGAGAGCTCACTGCTGCCCCTGGAGAACTGGCAGAAGGCGTGGCATGGCAGCAGCAT 52172 Query 21149 CATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCG 21208 ||| | | || || || ||||| || || || | ||| | | || || ||| Sbjct 52171 TATCAGAGGAAGATCTTTTGGATTCCAAGCACAAATGATGATTCTTCTATAGTTGGGGTT 52112 Query 21209 CCTGTTAATTAGATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGC 21268 | || ||| || | ||| | |||||||||| | | || || ||| | | Sbjct 52111 GGTTTTGATTGTGTCAATCACCTTTTGCAGCTGGTCTTCTCGTTGGCCTAAGTAATCTGA 52052 Query 21269 GTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAG 21328 | | |||| || || |||||||| |||| ||| || || || ||||| |||| Sbjct 52051 ATTCCTATCTTTGTATTCTGCTCCAAAATGCCTCCCCTGAAAACCATAAACCGGGCCCAA 51992 Query 21329 ATCGCCCTCGC-GGCGGTCCCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCC-GTG 21385 || || || || || ||| ||| | || | |||||||| ||||||| || ||| Sbjct 51991 GTCTCCTTCTTTGGTGGA----GAATCCCAG-GCTGTCCAAAAAGTCGCGGGATCCAGTG 51937 Query 21386 CGCGTCCCAAATTTTTACGCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGAT 21445 |||||| | ||||| || || | || || || | | | || || ||| |||| Sbjct 51936 -GCGTCCTAGATTTTCACTCCTTTGGAAGAGAGGTCTTTAGCATTTGTAGATCCCTTGAT 51878 Query 21446 AAACCACAGCAACTCCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGG 21505 |||||||||||||||||||| || ||| |||| || || | ||||||| | | |||||| Sbjct 51877 AAACCACAGCAACTCCTCCAAAACACCCTTCCAGAATACACGTTTGGTGATCAGCAGAGG 51818 Query 21506 AAACTCGTCCCTGAGGTTATATCGGGCCTGAAGCCCGAACACGGACCTGGTGCCCACGCC 21565 |||||| || | ||| | || | |||| || || |||||| || |||||| ||| Sbjct 51817 AAACTCATCTCCCAGGCTGTAGAGCGCCTACAGGCCAAACACGCACAGGGTGCCAGTGCC 51758 Query 21566 CGTCCTGTCCTCCCTC 21581 || | ||||||| || Sbjct 51757 AGTGCAGTCCTCCTTC 51742 >seq251882 Length=196254 Score = 170 bits (188), Expect = 2e-37 Identities = 414/623 (66%), Gaps = 13/623 (2%) Strand=Plus/Plus Query 20963 CAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAG 21022 ||| || || |||||||| || || ||||||| || | ||| |||||| || || || Sbjct 179284 CAAAGTATGTACAAAGTCACCTGGCTTCAGGCCTGTAATGTGCCCGATCATGTAGGTAAG 179343 Query 21023 GAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTA 21082 || || |||||||||||||| || | || || | ||||| ||| | || | ||||| Sbjct 179344 CAGAGCATAGCTGGCGATGTTGAAATGCACACCCAAGCCCAAGTCCTCCGAACGTTGGTA 179403 Query 21083 CAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAACGTGACAAGGAGG 21142 ||||||||| || |||| | | | ||||||| ||||| | | |||| || || || Sbjct 179404 CAGCTGGCACGAGAGCTGCTGCTG-CCCACGTACAACTGGTAGAGGGCGTGGCACGGCGG 179462 Query 21143 GAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTG 21202 ||||||||| | || || || ||||| || ||||| | ||| | | || | Sbjct 179463 CAGAGCCATCAG---AAGATCTTTTGGATTCCAAGCACACATGATGATTCTTCTGTCATT 179519 Query 21203 GGGCCGCCTGTTAATTAGATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTA 21262 ||| | || ||| || | ||| | |||| ||||| | || || || ||| Sbjct 179520 GGGGTTGGTTTTGATTGTGTCAATCACCTTCTGCAGTTGGTCTCCTCCTTGGCCTGAGTA 179579 Query 21263 GTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGG 21322 | | | | | |||| || ||||||||||| |||| ||| || || | ||| | Sbjct 179580 ATCTGAATTCACATCTTTGTATTCTGCCCCAAAATGCCTCCGCTGAAAGCCAGAAACCAG 179639 Query 21323 CCCCAGATCGCCCTCGCGGCGGTCCC----CGAAGCCCTGCGCCGCCAAAAAGGCGCGGG 21378 |||| || || || | || | ||| ||| | |||||||| | ||| Sbjct 179640 GCCCAAGTCTCCTTC----CTCTCTCATGGAGAATCCCAGACAGTCCAAAAAGTTGTGGG 179695 Query 21379 ACCCGTGCGCGTCCCAAATTTTTACGCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGC 21438 | || |||||||| ||||| || | | || | ||| | | | ||||| | Sbjct 179696 ATCCACTGGCGTCCCAGATTTTCACTTCCTTGGAAGAGATTTCTTTAGCAT-TGTGGATC 179754 Query 21439 CCCTGATAAACCACAGCAACTCCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTA 21498 || | | |||||||| ||||||||||| || || |||| || || | ||||||||| | Sbjct 179755 CCTTAACAAACCACAACAACTCCTCCAAAACAGCCTTCCAGAATACACATTTGGTGGTCA 179814 Query 21499 ACAGAGGAAACTCGTCCCTGAGGTTATATCGGGCCTGAAGCCCGAACACGGACCTGGTGC 21558 |||||||||||| || || ||| | || || ||||| || | |||||||||| ||||| Sbjct 179815 GCAGAGGAAACTCATCTCTCAGGCTGTAGCGAGCCTGCAGGCTGAACACGGACAGGGTGC 179874 Query 21559 CCACGCCCGTCCTGTCCTCCCTC 21581 ||| || | |||| || || Sbjct 179875 GGGTGCCAGTGCAGTCCCCCTTC 179897 >seq257211 Length=1294500 Score = 127 bits (140), Expect = 2e-24 Identities = 245/357 (69%), Gaps = 6/357 (2%) Strand=Plus/Minus Query 2890 CTCATAAACAGATTTTCCTCCAATAACCCAGACCGTGTTTAATTGTTCTTTTAGTTTGTA 2949 || ||||||||| | ||||| | |||||| ||| ||| || || | | || || Sbjct 1076413 CTTATAAACAGAACTGCCTCCCACAACCCAAACCATGTCTACTTTATTTGCTAATTCTGG 1076354 Query 2950 TTG-TCTATAGAAATTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCG 3008 ||| || ||| | || || ||||| || || || | || ||||| |||||||| || | Sbjct 1076353 TTGCTCAATA-AGTTTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGTGCTCCTTGTG 1076295 Query 3009 GTGGTTCACGTAATTCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCT 3068 | ||||| | ||||| || | || | ||||||||||| | ||| || |||| Sbjct 1076294 GGGGTTCCTTGAGTTCTCGACTGAGAACTAAATTAATTCTGTCTTTTAAAGGCCGATTCT 1076235 Query 3069 TTTCAGGGATGGAAAACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAA 3128 | ||||||||||| ||||| || || | |||||||| |||| ||||| || |||| | | Sbjct 1076234 TCTCAGGGATGGAGAACCAGGTCTTTCTACCCATAATCACCAGATTCTGTTTACCTTCTA 1076175 Query 3129 CCGATGGCGTAGACGTCATTTTCTGAAAATACATCATTTCGTTTCTAAGGTACGGCCAAG 3188 || | || | |||||| | || |||||| | | ||| || || || ||||| | Sbjct 1076174 TTGAAGAAGTTGTGGTCATTCTTTGGAAATACTTGAATTCATTCCTGAGCAGGGGCCACG 1076115 Query 3189 GCATTGTTCCGTTTTTACCAATTCCTAATTGTTC--ATCAACTGCAACGATGCAGTT 3243 ||| |||||| || || || || | ||||| || || ||||||||||| Sbjct 1076114 GCAGATCTCCGTTCTTGCCGATGCCCA--TGTTCTGGGACACAGCGACGATGCAGTT 1076060 >seq261394 Length=468452 Score = 120 bits (132), Expect = 3e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 ||||||| |||| ||| ||||||| || || || ||||| |||||||||||||| || | Sbjct 93276 TCAGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAAG 93335 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || ||||||||||| | |||| ||||||||||| || || ||||| || | Sbjct 93336 GCACACCCAGGCCCATGTCCCCCGACCGTTGGTACAGCTGACACGAGAGCTCGCCGCTGC 93395 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 ||||||| ||||| || | | || || || || || |||||| Sbjct 93396 CCACGTAGAACTGGCAGAGGGCATGGCACGGCGGCAGCGCCATC 93439 >seq261591 Length=704352 Score = 118 bits (130), Expect = 9e-22 Identities = 197/283 (70%), Gaps = 4/283 (1%) Strand=Plus/Plus Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022 || || ||||| || || || | || ||||| |||||||| || || ||||| | | Sbjct 427884 TTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGTGCTCCTTGTGGGGGTTCCTTGAGT 427943 Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082 |||| || | || | ||||||||||| | ||| || ||||| ||||||||||| Sbjct 427944 TCTCGACTGAGAACTAAATTAATTCTGTCTTTTAAAGGCCGATTCTTCTCAGGGATGGAG 428003 Query 3083 AACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGAC 3142 ||||| || || | |||||||| |||| ||||| || |||| | || || | || | Sbjct 428004 AACCAGGTCTTTCTACCCATAATCACCAGATTCTGTTTACCTTCTACTGAAGAAGTTGTG 428063 Query 3143 GTCATTTTCTGAAAATACATCATTTCGTTTCTAAGGTACGGCCAAGGCATTGTTCCGTTT 3202 |||||| | || |||||| | | ||| || || || ||||| |||| ||| || Sbjct 428064 GTCATTCTTTGGAAATACTTAAATTCATTCCTGAGCAGGGGCCACGGCAGATCTCCATTC 428123 Query 3203 TTACCAATTCCTAATTGTTC--ATCAACTGCAACGATGCAGTT 3243 || || || || | ||||| || |||||||||||||| Sbjct 428124 TTGCCGATGCCCA--TGTTCTGGGACACAGCAACGATGCAGTT 428164 >seq258222 Length=100183 Score = 118 bits (130), Expect = 9e-22 Identities = 243/357 (68%), Gaps = 6/357 (2%) Strand=Plus/Plus Query 2890 CTCATAAACAGATTTTCCTCCAATAACCCAGACCGTGTTTAATTGTTCTTTTAGTTTGTA 2949 || ||||||||| | ||||| | || ||| ||| ||| || || | | || || Sbjct 1133 CTTATAAACAGAACTGCCTCCCACAATCCAAACCATGTCTACTTTATTTGCTAATTCTGG 1192 Query 2950 TTG-TCTATAGAAATTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCG 3008 ||| || ||| | || || ||||| || || || | || ||||| |||||||| || | Sbjct 1193 TTGCTCAATA-AGTTTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGTGCTCCTTGTG 1251 Query 3009 GTGGTTCACGTAATTCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCT 3068 | ||||| | ||||| || | || | ||||||||||| | ||| | |||| Sbjct 1252 GGGGTTCCTTGAGTTCTCGACTGAGAACTAAATTAATTCTGTCTTTTAAAGGCAGATTCT 1311 Query 3069 TTTCAGGGATGGAAAACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAA 3128 | ||||||||||| ||||| || || | |||||||| |||| ||||| || |||| | | Sbjct 1312 TCTCAGGGATGGAGAACCAGGTCTTTCTACCCATAATCACCAGATTCTGTTTACCTTCTA 1371 Query 3129 CCGATGGCGTAGACGTCATTTTCTGAAAATACATCATTTCGTTTCTAAGGTACGGCCAAG 3188 | || | || | |||||| | || |||||| | | ||| || || || ||||| Sbjct 1372 CTGAAGAAGTTGTGGTCATTCTTTGGAAATACTTAAATTCATTCCTGAGCAGGGGCCACA 1431 Query 3189 GCATTGTTCCGTTTTTACCAATTCCTAATTGTTC--ATCAACTGCAACGATGCAGTT 3243 ||| |||||| || || || || | ||||| || ||||||||||| || Sbjct 1432 GCAGATCTCCGTTCTTGCCGATGCCCA--TGTTCTGGGACACAGCAACGATGCACTT 1486 >seq250505 Length=12927 Score = 118 bits (130), Expect = 9e-22 Identities = 197/283 (70%), Gaps = 4/283 (1%) Strand=Plus/Minus Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022 || || ||||| || || || | || ||||| |||||||| || || ||||| | | Sbjct 8650 TTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGTGCTCCTTGTGGGGGTTCCTTGAGT 8591 Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082 |||| || | || | ||||||||||| | ||| || ||||| ||||||||| | Sbjct 8590 TCTCGACTGAGAACTAAATTAATTCTGTCTTTTAAAGGCCGATTCTTCTCAGGGATGTAG 8531 Query 3083 AACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGAC 3142 ||||| || || | |||||||| |||| ||||| || |||| | || || | || | Sbjct 8530 AACCAGGTCTTTCTACCCATAATCACCAGATTCTGTTTACCTTCTACTGAAGAAGTTGTG 8471 Query 3143 GTCATTTTCTGAAAATACATCATTTCGTTTCTAAGGTACGGCCAAGGCATTGTTCCGTTT 3202 |||||| | || |||||| | | ||| || || || ||||| |||| |||||| Sbjct 8470 GTCATTCTTTGGAAATACTTAAATTCATTCCTGAGCAGGGGCCACGGCAGATCTCCGTTC 8411 Query 3203 TTACCAATTCCTAATTGTTC--ATCAACTGCAACGATGCAGTT 3243 || || || || | ||||| || |||||||||||||| Sbjct 8410 TTGCCGATGCCCA--TGTTCTGGGACACAGCAACGATGCAGTT 8370 >seq261392 Length=788104 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022 || || ||||| || || || | || ||||| | |||||| || || || || | || | Sbjct 536619 TTTAAGGCATCATCCAGACTTTTGGCAAGAAAATATGCTCCTTGTGGGGGCTC-CTTAGT 536561 Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082 ||||| || | || | ||||||||||| | | ||| | ||||| ||||||||||| Sbjct 536560 TCTCTACTGAGAACCA-ATTAATTCTGTCCTTTAAAGGCTGATTCTTCTCAGGGATGGAG 536502 Query 3083 AACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGAC 3142 ||||| ||| || | |||||||| |||| ||||| || |||| | || || | || | Sbjct 536501 AACCAGGTTTTTCTACCCATAATCACCAAATTCTGTTTACCTTCTACTGAAGAGGTTGTG 536442 Query 3143 GTCATTTTCTGAAAATACATCATTTCGTTTCTA 3175 ||||| | || |||||| | | ||| || ||| Sbjct 536441 GTCATCCTTTGGAAATACTTGAATTCATTCCTA 536409 >seq263908 Length=633351 Score = 105 bits (116), Expect = 6e-18 Identities = 201/289 (70%), Gaps = 8/289 (3%) Strand=Plus/Plus Query 2890 CTCATAAACAGATTTTCCTCCAATAACCCAGACCGTGTTTAATTGTTCTTT--TAGTTTG 2947 || ||||||||| | ||||| | | ||| ||| ||| ||| ||| ||| || || Sbjct 563958 CTTATAAACAGAACTGCCTCCCACCATCCAAACCATGTCTAA--GTTATTTGCTAATTCT 564015 Query 2948 TATTG-TCTATAGAAATTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTG 3006 ||| || ||| | || || ||||| || || || | || ||||| |||||||| || Sbjct 564016 GGTTGCTCAATA-AGTTTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGTGCTCCTTG 564074 Query 3007 CGGTGGTTCACGTAATTCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTT 3066 | ||||| | |||||| || | || | ||||||||||| | | ||| || || Sbjct 564075 TTGGGGTTCCTTGAGTTCTCTACTGAGAACCAAATTAATTCTGTCCTTTAAAGGCCGATT 564134 Query 3067 CTTTTCAGGGATGGAAAACCATGTTCTTT-TCCCCATAATAACCACATTCTTTTCACCTA 3125 ||| ||||| ||||| ||||| | ||||| | ||||| || |||| ||||| | |||| Sbjct 564135 CTTCTCAGGCATGGAGAACCA-GCTCTTTCTACCCATGATCACCAAATTCTGCTTACCTT 564193 Query 3126 CAACCGATGGCGTAGACGTCATTTTCTGAAAATACATCATTTCGTTTCT 3174 | || || | || | |||||| | || |||||| | | ||| || || Sbjct 564194 CTACTGAAGAGGTTGTGGTCATTCTTTGGAAATACTTGAATTCATTCCT 564242 >seq257204 Length=1338173 Score = 105 bits (116), Expect = 6e-18 Identities = 174/251 (69%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022 || || ||||| || || || | || ||||| |||| ||| || || ||||| | | Sbjct 589871 TTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGTGTTCCTTGTGGGGGTTCCTTGAGT 589812 Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082 ||||| | | || | ||||||||||| | | ||| | ||||| ||||||||||| Sbjct 589811 TCTCTACCAACAACTAAATTAATTCTGTCCTTTAAAGGCCAATTCTTCTCAGGGATGGAG 589752 Query 3083 AACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGAC 3142 ||||| || || |||||||||| |||| ||||| || |||| | || || | || | Sbjct 589751 AACCAGGTGTTTCTCCCCATAATCACCAAATTCTGTTTACCTTCTACTGAAGAGGTTGTG 589692 Query 3143 GTCATTTTCTGAAAATACATCATTTCGTTTCTAAGGTACGGCCAAGGCATTGTTCCGTTT 3202 || ||| | | |||||| | | ||| || || || ||||| |||| ||| || Sbjct 589691 GTAATTCTTTAGAAATACTTGAATTCATTCCTGAGTGGGGGCCAGGGCAAGCCTCCATTC 589632 Query 3203 TTACCAATTCC 3213 || ||||| || Sbjct 589631 TTGCCAATGCC 589621 >seq14725 Length=29362 Score = 104 bits (114), Expect = 2e-17 Identities = 187/271 (69%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 2890 CTCATAAACAGATTTTCCTCCAATAACCCAGACCGTGTTTAATTGTTCTTTTAGTTTGTA 2949 || ||||||||| | ||||| | | ||| ||||||| || || | | || ||| Sbjct 4305 CTTATAAACAGAACTGCCTCCCACTATCCAAACCGTGTCTACTTTATTTGCTAATTTTGG 4364 Query 2950 TTG-TCTATAGAAATTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCG 3008 ||| || ||| || || || | ||| ||||| || | || ||||| ||||||| | | Sbjct 4365 TTGCTCAATA-AATTTTAAGGTATCATCTAGACTTTTGGCAAGAAAATGTGCTCTTTCTG 4423 Query 3009 GTGGTTCACGTAATTCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCT 3068 | |||| | |||||| || | || ||||||||||| | | ||| || |||| Sbjct 4424 GGGGTTTCTTGAGTTCTCTACTGAGAACTTAATTAATTCTGTCCTTTAAAGGCCGGTTCT 4483 Query 3069 TTTCAGGGATGGAAAACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAA 3128 | ||||||||||| ||||| || || | ||||||| |||| ||| | || |||| | | Sbjct 4484 TCTCAGGGATGGAGAACCAAGTCTTTCTATCCATAATCACCAAATTTTATTTACCTTCTA 4543 Query 3129 CCGATGGCGTAGACGTCATTTTCTGAAAATA 3159 | || | || | ||||| || || ||||| Sbjct 4544 CTGAAGAGGTTGTGGTCATGTTTTGGAAATA 4574 >seq76734 Length=753 Score = 102 bits (112), Expect = 7e-17 Identities = 180/260 (69%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 2890 CTCATAAACAGATTTTCCTCCAATAACCCAGACCGTGTTTAATTGTTCTTTTAGTTTGTA 2949 || ||||||||| | ||||| | || ||| ||| ||| || || | | || || Sbjct 262 CTTATAAACAGAACTGCCTCCCACAATCCAAACCATGTCTACTTTATTTGCTAATTCTGG 203 Query 2950 TTG-TCTATAGAAATTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCG 3008 ||| || ||| | || || ||||| || || || | || ||||| |||||||| || | Sbjct 202 TTGCTCAATA-AGTTTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGTGCTCCTTGTG 144 Query 3009 GTGGTTCACGTAATTCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCT 3068 | ||||| | ||||| || | || | ||||||||||| | ||| || |||| Sbjct 143 GGGGTTCCTTGAGTTCTCGACTGAGAACTAAATTAATTCTGTCTTTTAAAGGCCGATTCT 84 Query 3069 TTTCAGGGATGGAAAACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAA 3128 | ||||||||| | ||||| || || | |||||||| |||| ||||| || |||| | | Sbjct 83 TCTCAGGGATGTAGAACCAGGTCTTTCTACCCATAATCACCAGATTCTGTTTACCTTCTA 24 Query 3129 CCGATGGCGTAGACGTCATT 3148 | || | || | |||||| Sbjct 23 CTGAAGAAGTTGTGGTCATT 4 >seq257026 Length=131746 Score = 100 bits (110), Expect = 2e-16 Identities = 166/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 2890 CTCATAAACAGATTTTCCTCCAATAACCCAGACCGTGTTTAATTGTTCTTTTAGTTTGTA 2949 || ||||||||| | ||||| | | ||| ||| ||| || || | | ||| || Sbjct 100019 CTTATAAACAGAACTGCCTCCCACTATCCAAACCATGTCTACTTTATTTGTTAATTCTGG 99960 Query 2950 TTG-TCTATAGAAATTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCG 3008 ||| || ||| | || || ||||| || || || | || || ||||||||||| || | Sbjct 99959 TTGCTCAATA-AGTTTTAAGGCATCATCCAGACTTTTGGCAAGGAAGTGTGCTCCTTGTG 99901 Query 3009 GTGGTTCACGTAATTCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCT 3068 | ||||| | ||||| || | || | ||||||||||| | | ||| | |||| Sbjct 99900 GGGGTTCCTTGAGTTCTCCACTGAGAACTAAATTAATTCTGTCCTTTAAAGGCTGATTCT 99841 Query 3069 TTTCAGGGATGGAAAACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTA 3125 | ||||||||||| ||||| ||| || | |||||| | |||| ||||| || || || Sbjct 99840 TCTCAGGGATGGAGAACCAGGTTTTTCTACCCATAGTCACCAAATTCTGTTTACTTA 99784 >seq262877 Length=221443 Score = 98.7 bits (108), Expect = 8e-16 Identities = 240/354 (68%), Gaps = 11/354 (3%) Strand=Plus/Plus Query 2893 ATAAACAGATTTTCCTCCAATAACCCAGACCGTGTTTAATTGTTCTTTTAGTT-TGTATT 2951 ||||||||| | ||||| | | ||| ||| ||| || || | | || || || | Sbjct 164168 ATAAACAGAACTGCCTCCCACCATCCAAACCATGTCTACTTTATTTGCTAATTCTGGCTG 164227 Query 2952 GTCTATAGAAATTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTG 3011 || ||| | || || ||||| || || || | || ||||| |||| ||| || || | Sbjct 164228 CTCAATA-AGTTTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGTGTTCCTTGTGG-G 164285 Query 3012 GTTCACGTAATTCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTT 3071 |||| | || |||| | || | |||||||||||| | ||| | ||||| | Sbjct 164286 GTTCCTTGAGTTTTCTG---AGAACTAGCTTAATTCTGTTCTTTAAAGGCCAATTCTTCT 164342 Query 3072 CAGGGATGGAAAACCATGTTCTTTTC-CCCATAATAACCACATTCTTTTCACCTACAACC 3130 |||||||||| ||||| ||||||| | ||| |||| |||| ||| | || |||| | || Sbjct 164343 CAGGGATGGAGAACCA-GTTCTTTCCACCCGTAATCACCAAATTTTGTTTACCTTCTACT 164401 Query 3131 GATGGCGTAGACGTCATTTTCTGAAAATACATCATTTCGTTTCTAAGGTACGGCCAAGGC 3190 || | || | |||||| | || |||||| | ||| || || || ||||| ||| Sbjct 164402 GAAGAGGTTGTGGTCATTCTTTGGAAATACTTGGATTCATTCCTGAGTGGGGGCCAGGGC 164461 Query 3191 ATTGTTCCGTTTTTACCAATTCCTAATTGTTCATCA-ACTGCAACGATGCAGTT 3243 | || ||| || || || || | ||||| | || ||||||| |||||| Sbjct 164462 AGGTCTCTGTTCTTGCCGATGCCCA--TGTTCTGGACACAGCAACGACGCAGTT 164513 >seq258550 Length=263792 Score = 98.7 bits (108), Expect = 8e-16 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022 || || ||||| || || || | || ||||| | |||||| || || ||||| ||| Sbjct 7762 TTTAAGGCATCATCCAGACTTTTGGCAAGAAAATATGCTCCTTGTGGGGGTTCCTTGAAT 7703 Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082 ||||| || | || ||||||||||| | ||| | ||||| |||||||||||| Sbjct 7702 TCTCTCCTGAGAACTGAATTAATTCTGTCTTTTAAAGGCTGATTCTTCTCAGGGATGGAA 7643 Query 3083 AACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCT 3124 ||| | |||||| | |||||| |||||| ||||| || |||| Sbjct 7642 AACAAGGTTCTTCTACCCATAGTAACCAAATTCTGTTTACCT 7601 >seq260770 Length=853696 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022 || || ||||| || || || | || ||||| |||||||| || | ||||| | | Sbjct 124636 TTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGTGCTCCTTGTAGGGGTTCCTTGAGT 124695 Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082 ||||| || | || | ||||||||||| | ||| | ||||| |||||||||| Sbjct 124696 TCTCTACTGAGAACTAAATTAATTCTGTCATTTAAAGGCCTGTTCTTCTCAGGGATGGGG 124755 Query 3083 AACCATGTTCTTT-TCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGA 3141 ||||| ||||||| | || ||||| |||| ||||| || |||| | || || | || | Sbjct 124756 AACCA-GTTCTTTCTACCTATAATCACCAAATTCTGTTTACCTTCTACTGAAGAGGTTGT 124814 Query 3142 CGTCATTTTCTGAAAATACATCATTTCGTTTCTA 3175 | | ||| | || ||||| | | ||| || ||| Sbjct 124815 CATAATTCTTTGGGAATACTTGAATTCATTCCTA 124848 >seq252671 Length=96844 Score = 91.5 bits (100), Expect = 1e-13 Identities = 178/259 (69%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 2987 GCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAATTCTCTGCTCAAAATAATATTAATT 3046 || || || |||||||| || || ||||| | ||| || || | || | ||||||| Sbjct 49655 GCAAGCAAATGTGCTCCTTGTGGGGGTTCCTTGAGTTCCCTACTGAGAACTAAATTAATT 49714 Query 3047 CTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAAAACCATGTTCTTTTCCCCATAATA 3106 |||| | | ||| | ||||| ||||||||||| ||||| || || | |||||||| Sbjct 49715 CTGTCCTTTAAAGGCCAATTCTTCTCAGGGATGGAGAACCAGGTCTTTCTACCCATAATC 49774 Query 3107 ACCACATTCTTTTCACCTACAACCGATGGCGTAGACGTCATTTTCTGAAAATACATCATT 3166 |||| |||| || |||| | || || | || || ||||| | || ||| || | | | Sbjct 49775 ACCAAATTCAATTTACCTTCTACTGAAGATGT-GA--TCATTCTTTGGAAACACTTGAAT 49831 Query 3167 TCGTTTCTAAGGTACGGCCAAGGCATTGTTCCGTTTTTACCAATTCCTAATTGTTC--AT 3224 || || || ||| | || || |||| ||| || | ||||| || | ||||| | Sbjct 49832 TCATTCCTGAGGGAGGGACAGGGCAGGTCTCCATTCTGGCCAATGCCCA--TGTTCTGGT 49889 Query 3225 CAACTGCAACGATGCAGTT 3243 | |||| ||||||||| Sbjct 49890 ACAGAGCAATGATGCAGTT 49908 >seq181268 Length=46976 Score = 89.7 bits (98), Expect = 4e-13 Identities = 165/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022 || || ||||| ||||| || | || ||||| ||||| || || | |||||| | | Sbjct 40729 TTTAAGGCATCCTCTAGATTTTTGGCCAGAAAATGTGCCCCTTGTGTGGGTTCAATGAGT 40788 Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082 ||||| || | || | ||||||||||| | | ||| | || || | ||||||||| Sbjct 40789 TCTCTACTGAGAACTAAATTAATTCTGTCCTTTACAGGCTGATTATTCTTAGGGATGGAG 40848 Query 3083 AACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGAC 3142 ||||| || || | ||||||| |||| ||| | || | | | || || | || | Sbjct 40849 AACCAGGTCTTTCTATCCATAATCACCAAATTGTGTTTAAGTTCTACTGAAGAGGTTGTG 40908 Query 3143 GTCATTTTCTGAAAATACATCATTTCGTTTCTAAGGTACGGCCAAGGCATTGTTCCGTTT 3202 |||||| | || |||||| | | ||| || || || ||||| |||| |||||| Sbjct 40909 GTCATTCTTTGGAAATACTTGAATTCTTTCCTGAGTGGGGGCCAGGGCAGGTCTCCGTTC 40968 Query 3203 TT 3204 || Sbjct 40969 TT 40970 >seq253489 Length=348823 Score = 86.0 bits (94), Expect = 5e-12 Identities = 114/157 (73%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022 || || ||||| || || || | || ||||| |||||||| || | ||||| | | Sbjct 46790 TTTAAGGCATCATCCAGATTTTTGGCAAGAAAATGTGCTCCTTGTAGGGGTTCCTTGATT 46731 Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTT-CACCAGAGGGCGCTTCTTTTCAGGGATGGA 3081 ||||| || | || | |||||||||||| | | ||| || ||||| | ||||||||| Sbjct 46730 TCTCTACTGAGAACTAAATTAATTCTGTTCCTTTAAAGGCCGATTCTTCTAAGGGATGGA 46671 Query 3082 AAACCATGTTCTTTTCCCCATAATAACCACATTCTTT 3118 ||||| || ||| | || ||||| |||| ||| ||| Sbjct 46670 GAACCAGGTCCTTCTGCCTATAATCACCAAATTGTTT 46634 >seq252863 Length=13158 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022 || || ||||| || || || | || ||||| |||||||| | || |||| | | Sbjct 1994 TTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGTGCTCCTTTTGGAGGTTTCTTGAGT 1935 Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082 ||||| || | || | ||| ||||||| | | ||| | ||||| ||||| |||||| Sbjct 1934 TCTCTACTGAGAACTAAATTTATTCTGTCCTTTAAAGGCTGATTCTTCTCAGGAATGGAA 1875 Query 3083 AACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGAC 3142 ||||| || || | ||||||| |||| ||| |||| || | | || || | || | Sbjct 1874 AACCAGGTCTTTCTAACCATAATCACCAAATTGTTTTTACTTTCCACAGAAGAGGTTGTG 1815 Query 3143 GTCATTTTCTGAAAATA 3159 || ||| | |||||||| Sbjct 1814 GTAATTCTTTGAAAATA 1798 >seq238652 Length=38978 Score = 84.2 bits (92), Expect = 2e-11 Identities = 170/251 (68%), Gaps = 1/251 (0%) Strand=Plus/Plus Query 2963 TTAAACGCATCGTCTAGCGTTCTCGCTAGAAAGTGTGCTCCGTGCGGTGGTTCACGTAAT 3022 || || ||||| || || || |||| | | | |||||||| || || ||||| | | Sbjct 6030 TTTAAGGCATCCTCCAGACTTTTCGCAAAACAATGTGCTCC-TGTGGGGGTTCCTTGAGT 6088 Query 3023 TCTCTGCTCAAAATAATATTAATTCTGTTCACCAGAGGGCGCTTCTTTTCAGGGATGGAA 3082 ||||| | | | | | |||| ||||| | | ||| || ||||| ||||||||||| Sbjct 6089 TCTCTACAAAGATTTAGGTTAACTCTGTCCTTTAAAGGCCGATTCTTCTCAGGGATGGAG 6148 Query 3083 AACCATGTTCTTTTCCCCATAATAACCACATTCTTTTCACCTACAACCGATGGCGTAGAC 3142 ||||| || || | ||||||| |||| ||||| || || | | || || | | | Sbjct 6149 AACCAAGTCTTTCTATCCATAATCACCAAATTCTGTTTACTTTCTACTGAAGAGGGTGTG 6208 Query 3143 GTCATTTTCTGAAAATACATCATTTCGTTTCTAAGGTACGGCCAAGGCATTGTTCCGTTT 3202 |||||| | || |||||| | | ||| || || || | | | |||| || |||| Sbjct 6209 GTCATTCTTTGGAAATACTTGAATTCATTCCTGAGCAGGGACTAGGGCAGGTTTTCGTTC 6268 Query 3203 TTACCAATTCC 3213 ||||| || || Sbjct 6269 TTACCGATGCC 6279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426373125184320