Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq260417 89.7 4e-13 >seq260417 Length=1194950 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | ||||| ||||||| || || | || |||| || || |||||||| Sbjct 431895 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTCCCGGCAAA 431836 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 ||||||| ||| || || | || | ||||| || || |||| | ||||| | Sbjct 431835 GATCAATCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 431776 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 ||| ||||| | | ||| || || | || |||||||| || |||| |||||||| Sbjct 431775 CTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATAGTTTTACCCGTTAAGGTTTTCAC 431716 Query 43098 AAAAATTTGCATTTTCT 43114 ||| || |||||| ||| Sbjct 431715 AAAGATCTGCATTGTCT 431699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380118913174872