Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq257629 114 1e-20 >seq257629 Length=1333514 Score = 114 bits (126), Expect = 1e-20 Identities = 105/133 (79%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199 |||| |||||||| || ||||| |||| || ||||||||||||||||||||||| || | Sbjct 756856 AGGGTTACCTGGGTTGCGAGGCCTTGTCGGAGATGATCCAGTTTTACCTGGAGGAGGTGA 756915 Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259 |||| |||||||| || || | ||| | ||| ||||| |||| || ||||| || | Sbjct 756916 TGCCCCAGGCTGAGAACCATGGCCCAGAAATCAAGGAGCATGTGAGTTCCCTGGGAGAAA 756975 Query 10260 ATCTAAAGACCCT 10272 | || |||||||| Sbjct 756976 AGCTGAAGACCCT 756988 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418 |||| || || ||||| |||||||| |||||||||||||||||||| || || ||||| | Sbjct 759165 AGCTCCAAGAGAAAGGCGTCTACAAGGCCATGAGTGAATTTGACATCTTCATCAACTACA 759224 Query 10419 TAGAAGCATACATGACCATGAAAATT 10444 ||||| | || ||||| |||| ||| Sbjct 759225 TAGAATCCTATATGACATTGAAGATT 759250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545538062691840