Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq260417 123 2e-23 seq93685 116 3e-21 seq254768 113 4e-20 seq43725 107 2e-18 seq259686 96.9 3e-15 seq78631 96.9 3e-15 seq252703 93.3 4e-14 seq250175 93.3 4e-14 seq260357 91.5 1e-13 seq39485 87.8 2e-12 >seq260417 Length=1194950 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || ||| ||||| | |||| |||| ||||| || || ||||| || | ||| || || Sbjct 431934 CATTCCCCCTCTAAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 431875 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 | || ||| | ||| |||||||| || ||| ||||||| ||||| ||||| || || Sbjct 431874 GGACAGGGTGCGGCCATCTTCCAGCTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCAGG 431815 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 || || ||||| ||||| | || || |||||||| | | |||||| | | || Sbjct 431814 GGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTC 431755 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||||| ||||| || || | |||||||||||||||||||| Sbjct 431754 CACCTCGAGGGTGATAGTTTTACCCGTTAAGGTTTTCACAAAGATCTGCAT 431704 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || ||||| |||| |||| ||||| || || || || || | ||| || ||| | Sbjct 432386 CCGCCCCTCAAGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGTATGTTGTAGTCGGAC 432327 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | |||||||||||| || ||| ||||||| ||||| ||||| || || || Sbjct 432326 AGGGTGCGGCCATCCTCCAGCTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCAGGGGGG 432267 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | || || |||||||| | | |||||| | | || || Sbjct 432266 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACC 432207 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || ||||| || || ||||| || |||||||| Sbjct 432206 TCGAGGGTGATGGTCTTCCCAGTCAGGGTCTTCACGAAAATCTGCAT 432160 Score = 120 bits (132), Expect = 3e-22 Identities = 170/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| | | || ||| ||||| | |||| |||| ||||| || || || || || | | Sbjct 432170 AAAATCTGCATTCCCCCTCTAAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATG 432111 Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888 || || ||| || ||| | ||| |||||||| || ||| ||||||| ||||| ||| Sbjct 432110 TTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTCCCGGCAAAGATCAATCTCTGC 432051 Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948 || || || || || ||||| ||||| | || || |||||||| | | |||||| Sbjct 432050 TGGTCAGGGGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTGTCA 431991 Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | || || || | |||||||| || ||||| || || ||||| ||||||||||| Sbjct 431990 CTGGGCTCCACCTCGAGGGTGATGGTCTTCCCAGTCAGGGTCTTCACGAAGATCTGCAT 431932 >seq93685 Length=1386 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| || | |||| ||||| ||||| || |||||||| || | ||| ||||| Sbjct 803 CCTCCCCTGAGGCGCAGCACCAGGTGCAGGGTGGATTCCTTCTGGATGTTGTAATCAGAG 862 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | || |||||||| || || ||||||| | || ||||| || || || Sbjct 863 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 922 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || || || | || || ||||||||| ||| |||||| | | || || Sbjct 923 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 982 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || ||||| || || ||||| ||||||||||||| Sbjct 983 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATGC 1031 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| || | |||| |||| ||| | ||| |||||||| || | ||| ||||| Sbjct 1031 CCTCCCCTGAGGCGCAGGACCAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAATCAGAG 1090 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 1091 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 1150 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || || || | || || ||||||||| ||| |||||| | | || || Sbjct 1151 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 1210 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || ||||| || || ||||| ||||||||||||| Sbjct 1211 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATGC 1259 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||| ||||| || || || || || | ||| ||||| || |||| | | Sbjct 587 CGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGACAGAGTGCGGCCA 646 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || || | ||||| | || ||||| || || ||||| || || || Sbjct 647 TCCTCCAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTA 706 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| ||| |||||| | | || || || | |||||| Sbjct 707 TCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCTACCTCCAGGGTGATG 766 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || || || ||||| ||||||||||||| Sbjct 767 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATGC 803 >seq254768 Length=650996 Score = 113 bits (124), Expect = 4e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||| ||||| || || || || || | ||| ||||| || |||| | | Sbjct 217987 CGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGACAGAGTGCGGCCA 218046 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || || | ||||| | || ||||| || || ||||| || || || Sbjct 218047 TCCTCCAGCTGCTTGCCAGCGAAGATAAGCCTCTGCTGGTCAGGGGGAATGCCCTCCTTA 218106 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| ||| |||||| | | || || || | |||||| Sbjct 218107 TCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 218166 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || ||||| || || ||||| ||||||||||||| Sbjct 218167 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATGC 218203 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| || | |||| |||| ||| | ||| |||||||| || | ||| ||||| Sbjct 218203 CCTCCCCTGAGGCGCAGGACCAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAATCAGAG 218262 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 218263 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 218322 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || || || | || || ||||||||| ||| |||||| | | || || Sbjct 218323 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 218382 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || ||||| || || ||||| ||||||||||| Sbjct 218383 TCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 218429 >seq43725 Length=1898 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || ||||| |||| |||| ||||| || || || || || | ||| || || | Sbjct 1804 CCACCCCTCAAGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 1745 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | || |||||||| || ||| ||||||| ||||| ||||| || || || Sbjct 1744 AGGGTGTGGCCGTCTTCCAGCTGCTTCCCGGCAAAGATCAATCTCTGCTGGTCAGGGGGG 1685 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | || || ||||||||| | |||||| | | || || Sbjct 1684 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCAGTGGTGTCACTGGGCTCTACC 1625 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || || | || || ||||| ||||||||||| Sbjct 1624 TCGAGGGTGATGGTCTTCCCGGACAGGGTCTTCACGAAGATCTGCAT 1578 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || ||| | ||| | |||| |||| ||||| || || ||||| || | ||| || || Sbjct 1352 CATTCCCCGTCTAAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 1293 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 || ||| | ||| |||||||| || || ||||||| ||||| ||||| || || Sbjct 1292 AGACAGGGTGCGGCCATCTTCCAGCTGCTTCCCAGCAAAGATCAATCTCTGCTGGTCAGG 1233 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 || || || || ||||| | || || |||||||| | |||||| | | || Sbjct 1232 GGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAGTGGTGTCACTGGGCTC 1173 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || |||| ||||| ||||| || || | |||||||||||||||||||| Sbjct 1172 CACCTCAAGGGTGATAGTTTTACCCGTTAAGGTTTTCACAAAGATCTGCAT 1122 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||||| || || || || || | ||| || ||| || ||| | || ||| Sbjct 1558 ACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCC 1499 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| ||||| ||||| || | || || ||||| ||||| | Sbjct 1498 AGCTGCTTCCCAGCAAAGATCAATCTCTGCTGGTCAGAGGGGATGCCTTCCTTGTCTTGG 1439 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || |||||||| | |||||| | | || || || | || ||||| || Sbjct 1438 ATCTTGGCCTTGACATTCTCAGTGGTGTCACTGGGCTCTACCTCGAGGGTAATGGTCTTC 1379 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || ||||||||||||||||| Sbjct 1378 CCAGTCAGGGTCTTCACAAAGATCTGCAT 1350 >seq259686 Length=587844 Score = 96.9 bits (106), Expect = 3e-15 Identities = 204/302 (68%), Gaps = 2/302 (1%) Strand=Plus/Plus Query 43609 GATCTTCTTCCAGTTCAGGGTAAGATATCTTTTCACAAATGAGCTGGGCGATTCTGTCTC 43668 || |||| || | ||| || ||| | || ||||||||| ||||| || |||| || | Sbjct 439166 GAACTTCCTCTATTTCTGGATAAAAAATGCGTTCACAAATCAGCTGTGCAATTCGATCAC 439225 Query 43669 CCTGCAGCACGTAAAAAGTGTGCTTATCGTGGTTGAATAGCACCACGCCCACGTTTCCCC 43728 ||| ||| | ||| | | | | || |||| ||| || || || ||||| | Sbjct 439226 CCTTTTTCACTTCAAACTTTTCTGTGCCAAAATTAAATAACACAACACCAACATTTCCTC 439285 Query 43729 TATAGTCTTCGTCTATTACGCCCGCGCCTACGTCTATTCCGTGACGTACTGCCAAGCCTG 43788 |||||||||| ||||| || || || ||||| ||||| ||| | | |||||||| | Sbjct 439286 TATAGTCTTCATCTATGACACCAGCTCCTACATCTATGAAGTGTTTTGCAGCCAAGCCAG 439345 Query 43789 ATCTGGCGGCCACCCTGCCATAATGTCCGTGAGGCACGGCTACCCGTATGTCCGTTTTTA 43848 | | | || || || |||||| ||| ||| | ||||| | | ||||| ||||| | Sbjct 439346 AACATGGAGCTACTCTTCCATAACATCCAGAAGGAAGGGCTATCTGAATGTCTGTTTTCA 439405 Query 43849 CGA-GGCTGTAGCCTTTGGGTTCTATGGCCAAATCTTGGGCGCTGTACAGATCGTACCCG 43907 | | |||| | || ||||| || | |||| | ||| |||||||| || || || Sbjct 439406 CAAGGGCTTTCTCC-ATGGGTGGTACTGTATAATCATAGGCACTGTACAGGTCATAGCCT 439464 Query 43908 GC 43909 || Sbjct 439465 GC 439466 >seq78631 Length=346750 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || |||||| | || | ||| || |||||||| | ||| || || || ||| Sbjct 179197 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCC 179256 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| ||||| || || || ||||||| | ||| |||||||| |||||||| ||||| || Sbjct 179257 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTT 179316 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || || || || || | | || || | | | || || |||| ||||| Sbjct 179317 ATCCTGGATCTTGGCTTTCACATTTTCTATTGTATCCGAGGGTTCAACCTCAAGAGTGAT 179376 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||| || || ||||| || || |||||||| Sbjct 179377 GGTTTTTCCCGTCAGGGTTTTTACGAAAATCTGCAT 179412 >seq252703 Length=225757 Score = 93.3 bits (102), Expect = 4e-14 Identities = 201/301 (67%), Gaps = 0/301 (0%) Strand=Plus/Minus Query 43609 GATCTTCTTCCAGTTCAGGGTAAGATATCTTTTCACAAATGAGCTGGGCGATTCTGTCTC 43668 || |||| || | ||| || ||| | || ||||||||| ||||| || |||| || | Sbjct 208613 GAACTTCCTCTATTTCTGGATAAAAAATGCGTTCACAAATCAGCTGTGCAATTCGATCAC 208554 Query 43669 CCTGCAGCACGTAAAAAGTGTGCTTATCGTGGTTGAATAGCACCACGCCCACGTTTCCCC 43728 ||| ||| | ||| | | | | || |||| ||| || || || ||||| | Sbjct 208553 CCTCTTTCACTTCAAACTTTTCTGTGCCAAAATTAAATAACACAACACCAACATTTCCTC 208494 Query 43729 TATAGTCTTCGTCTATTACGCCCGCGCCTACGTCTATTCCGTGACGTACTGCCAAGCCTG 43788 |||||||||| ||||| || || || ||||| ||||| ||| | | |||||||| | Sbjct 208493 TATAGTCTTCATCTATGACACCAGCTCCTACATCTATGAAGTGTTTTGCAGCCAAGCCAG 208434 Query 43789 ATCTGGCGGCCACCCTGCCATAATGTCCGTGAGGCACGGCTACCCGTATGTCCGTTTTTA 43848 | | | || || || | |||| ||| ||| | ||||| | | ||||| ||||| | Sbjct 208433 AACGTGGAGCTACTCTTCTATAACATCCAGAAGGAAGGGCTATCTGAATGTCTGTTTTCA 208374 Query 43849 CGAGGCTGTAGCCTTTGGGTTCTATGGCCAAATCTTGGGCGCTGTACAGATCGTACCCGG 43908 | ||| | || ||||| || | |||| | ||| |||||||| || || || | Sbjct 208373 CAAGGGCTTTCCCCATGGGTGGTACTGTATAATCATAGGCACTGTACAGGTCATAGCCTG 208314 Query 43909 C 43909 | Sbjct 208313 C 208313 >seq250175 Length=443462 Score = 93.3 bits (102), Expect = 4e-14 Identities = 194/289 (67%), Gaps = 0/289 (0%) Strand=Plus/Minus Query 43609 GATCTTCTTCCAGTTCAGGGTAAGATATCTTTTCACAAATGAGCTGGGCGATTCTGTCTC 43668 || |||| || | ||| || ||| | || ||||||||| ||||| || |||| || | Sbjct 398234 GAACTTCCTCTATTTCTGGATAAAAAATGCATTCACAAATCAGCTGTGCAATTCGATCAC 398175 Query 43669 CCTGCAGCACGTAAAAAGTGTGCTTATCGTGGTTGAATAGCACCACGCCCACGTTTCCCC 43728 ||| ||| | ||| | | | | || |||| ||| || || || ||||| | Sbjct 398174 CCTTTTTCACTTCAAACTTTTCTGTGCCAAAATTAAATAACACAACACCAACATTTCCTC 398115 Query 43729 TATAGTCTTCGTCTATTACGCCCGCGCCTACGTCTATTCCGTGACGTACTGCCAAGCCTG 43788 |||||||||| ||||| || || || ||||| ||||| ||| | | |||||||| | Sbjct 398114 TATAGTCTTCATCTATGACACCAGCTCCTACATCTATGAAGTGTTTTGCAGCCAAGCCAG 398055 Query 43789 ATCTGGCGGCCACCCTGCCATAATGTCCGTGAGGCACGGCTACCCGTATGTCCGTTTTTA 43848 | | | || || || |||||| ||| ||| | ||||| | | ||||| ||||| | Sbjct 398054 AACGTGGAGCTACTCTTCCATAACATCCAGAAGGAAGGGCTATCTGAATGTCTGTTTTCA 397995 Query 43849 CGAGGCTGTAGCCTTTGGGTTCTATGGCCAAATCTTGGGCGCTGTACAG 43897 | ||| | || ||||| || | |||| | ||| |||||||| Sbjct 397994 CAAGGGCTTTCCCCATGGGTGGTACTGTATAATCATAGGCACTGTACAG 397946 >seq260357 Length=355543 Score = 91.5 bits (100), Expect = 1e-13 Identities = 182/270 (67%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 43640 TTCACAAATGAGCTGGGCGATTCTGTCTCCCTGCAGCACGTAAAAAGTGTGCTTATCGTG 43699 ||||||||| ||||| || |||| || |||| ||| | ||| | | | | Sbjct 322414 TTCACAAATCAGCTGTGCAATTCAATCACCCTTTTTCACTTCAAACTTTTCTGTGCCAAA 322355 Query 43700 GTTGAATAGCACCACGCCCACGTTTCCCCTATAGTCTTCGTCTATTACGCCCGCGCCTAC 43759 || |||| ||| || || || ||||| ||||||||||| ||||| || || || ||||| Sbjct 322354 ATTAAATAACACAACACCAACATTTCCTCTATAGTCTTCATCTATGACACCAGCTCCTAC 322295 Query 43760 GTCTATTCCGTGACGTACTGCCAAGCCTGATCTGGCGGCCACCCTGCCATAATGTCCGTG 43819 ||||| ||| | | |||||||| || | | || || || |||||| ||| Sbjct 322294 ATCTATGAAGTGTTTTGCAGCCAAGCCAGAACGTGGAGCTACTCTTCCATAACATCCAGA 322235 Query 43820 AGGCACGGCTACCCGTATGTCCGTTTTTACGAGGCTGTAGCCTTTGGGTTCTATGGCCAA 43879 ||| | ||||| | | ||||| ||||| || ||| | || ||||| || | | Sbjct 322234 AGGAAGGGCTATCTGAATGTCTGTTTTCACAAGGGCTTTCCCCATGGGTGGTACTGTATA 322175 Query 43880 ATCTTGGGCGCTGTACAGATCGTACCCGGC 43909 ||| | ||| |||||||| || || || || Sbjct 322174 ATCATAGGCACTGTACAGGTCATAGCCTGC 322145 >seq39485 Length=23403 Score = 87.8 bits (96), Expect = 2e-12 Identities = 200/301 (66%), Gaps = 0/301 (0%) Strand=Plus/Plus Query 43609 GATCTTCTTCCAGTTCAGGGTAAGATATCTTTTCACAAATGAGCTGGGCGATTCTGTCTC 43668 || |||| || | ||| || ||| | || | ||||||||| ||||| || |||| || | Sbjct 18161 GAACTTCCTCTATTTCTGGATAAAAAATGTGTTCACAAATCAGCTGTGCAATTCGATCAC 18220 Query 43669 CCTGCAGCACGTAAAAAGTGTGCTTATCGTGGTTGAATAGCACCACGCCCACGTTTCCCC 43728 ||| |||| | ||| | | | | || |||| ||| || || || ||||| | Sbjct 18221 CCTTTTGCACTTCAAACTTTTCTGTGCCAAAATTAAATAACACAACACCAACATTTCCTC 18280 Query 43729 TATAGTCTTCGTCTATTACGCCCGCGCCTACGTCTATTCCGTGACGTACTGCCAAGCCTG 43788 |||||||||| | ||| || || ||||| ||||| ||| | | |||||||| | Sbjct 18281 TATAGTCTTCATTTATGACACCACTTCCTACATCTATGAAGTGTTTTGCAGCCAAGCCAG 18340 Query 43789 ATCTGGCGGCCACCCTGCCATAATGTCCGTGAGGCACGGCTACCCGTATGTCCGTTTTTA 43848 | | | || || || |||||| ||| ||| | ||||| | | ||||| |||| | Sbjct 18341 AACGTGGAGCTACTCTTCCATAACATCCAGAAGGAAGGGCTATCTGAATGTCTATTTTCA 18400 Query 43849 CGAGGCTGTAGCCTTTGGGTTCTATGGCCAAATCTTGGGCGCTGTACAGATCGTACCCGG 43908 | ||| | || ||||| || | |||| | ||| |||||||| || || || | Sbjct 18401 CAAGGGCTTTCCCCATGGGTGGTACTGTATAATCATAGGCACTGTACAGGTCATAGCCTG 18460 Query 43909 C 43909 | Sbjct 18461 C 18461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446783350134240