Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq257400 264 1e-65 seq253961 194 2e-44 seq250257 194 2e-44 seq48835 136 4e-27 seq253765 134 1e-26 seq166132 132 5e-26 seq254358 105 7e-18 seq90388 86.0 7e-12 seq261563 82.4 8e-11 seq238623 82.4 8e-11 >seq257400 Length=867372 Score = 264 bits (292), Expect = 1e-65 Identities = 627/943 (66%), Gaps = 10/943 (1%) Strand=Plus/Plus Query 21122 TTTATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCC 21181 || ||||| || |||||||| || | || || ||| | | ||||| | |||| Sbjct 653775 TTCATTTAGAAGTCAGCATCCAAAGTAAAGGAGTTTTCTGTTGAAGTCGACATCACTCCC 653834 Query 21182 ATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATA 21241 || | ||||| || | ||||| || || || || |||||||| ||||||| || ||| Sbjct 653835 ATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTTGTCTTCCCTTCCAGCGAAATA 653894 Query 21242 GATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGAT 21301 |||||||| ||||| ||||| || | | || | || | |||||||||| | Sbjct 653895 TTCTCCATAAAGTCAAAGGGATTCTCCACTCTGAAAACCTTGCTGAAACCCAGTTCC-AG 653953 Query 21302 AATAA-TCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGAT 21360 |||| ||| ||||| || ||||| || || || |||||| |||||||| || || Sbjct 653954 CATAAGTCTGTCTGCCACGAATTCAATGTACTGCTTCATTAAAGTGCAATTCATTCCAAT 654013 Query 21361 CAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAAT 21420 || || ||||| | || | || | || | |||||| || || | | ||| Sbjct 654014 CAGCTTGACAGGCAAGGCCTCCGTAAGGAACTCCTGTTCTATCCTAACAGCATTGATAAT 654073 Query 21421 TATATTTATTATCCTAGATGTACT--AGGGGGATACAATAATTGTTTAAACATCAAACAT 21478 ||| | | ||| || ||| | ||| | | | ||||| ||||| | || Sbjct 654074 TATTTCTTTTACTCTC--TGTTCCGAAGGTTTGTGAAGCAGGTGTTTGAACATGAGGCAG 654131 Query 21479 GCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCG 21538 ||||| ||||| || ||||| ||||| || || || | |||||| |||||||| | || Sbjct 654132 GCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCA 654191 Query 21539 GGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATG 21598 ||||| ||||||| || || | ||| || || || ||||| | || |||||||| || Sbjct 654192 GGCATCAATCCTCGTTTCTTAAGCCAGAAGATGGATGCAAAAGAGCCAGAAAAGAAGATT 654251 Query 21599 CCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATC 21658 || || || || ||||| || || | ||||| || || |||| |||||| ||| ||| Sbjct 654252 CCTTCTACTGCTGCAAAAGCTACGACACGTTCTCCATAGGTAGCTTCTTTGTCCCCAATC 654311 Query 21659 CATTTTTCTGCCCATTTTGCCTT-TTCTTTAATACAATCAATTGTATCAATAGCTTTTAA 21717 || ||||| | |||||| ||||||| ||| || || ||||| || || || Sbjct 654312 CAACGCAAGGCCCAGTCTGCCTTCTTCTTTACG-CAAGGCATCGTTTCAATTGCATTGAA 654370 Query 21718 AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTC 21777 ||| | |||| | ||| | ||| |||||||||||| Sbjct 654371 GAGAAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCGATAAGGAGACTATACATTTC 654430 Query 21778 AGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTG 21837 |||||||| ||||| || || || || || || || ||||| | || |||| | || Sbjct 654431 GGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTG 654490 Query 21838 AACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAA 21897 ||| || |||||| | ||||||||||||||||||| |||||||| || ||||| Sbjct 654491 AACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAA 654550 Query 21898 AAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTCCAAT-CTA 21956 || || | | || | ||||||||||| || | | | | || ||| | || Sbjct 654551 GAAAGCTAGAACATGTGATATAAAATATCTCTCCTCAGGCTTCAGGGCTTCCCAGTGCTG 654610 Query 21957 ATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTAT 22016 | | || || || | ||| || || |||| |||||||||| ||| ||| || |||| Sbjct 654611 A-ATGTCCTTGGAAAGATCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTAT 654669 Query 22017 ACATAATCCAGATATCATTATATATTATTGGAAATATTACAAA 22059 |||| ||| ||||||| ||| || ||||| || ||||| Sbjct 654670 ACATCTGCCAAATATCATGGTATTCGATAGGAAAGATGACAAA 654712 >seq253961 Length=405542 Score = 194 bits (214), Expect = 2e-44 Identities = 583/895 (65%), Gaps = 18/895 (2%) Strand=Plus/Plus Query 21171 ACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTT 21230 |||| |||||| | | ||||| | | ||||| || || || || |||||||| |||| Sbjct 310097 ACATCATTCCCTTCCTCTGATACTTGCCTACTCTCTTCTCAAAGAAGTTTGTCTTCCCTT 310156 Query 21231 CCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAAC 21290 || ||| ||| |||||||| ||||| || | | | | || | || | ||| Sbjct 310157 CCTGTGAAATATTCTCCATAAAGTCAAAGAGACTCTGCACTCTGAAAACCTTGCTGAAAC 310216 Query 21291 CCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAAT 21350 ||||||| | |||| ||||| || ||||| || || || |||||| |||| Sbjct 310217 CCAGTTCC-AGCATAAG---TCTGCCACGAATTCAATGTACTGCTTCATTAAAGTGCAAT 310272 Query 21351 TCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGG 21410 |||| || |||| || ||| | | || | | || | | |||||| || | Sbjct 310273 TCATTCCCATCAGCTTGACAAGCAAGGCCCCCATAAGGAACGCCTGTTCTATCCTAACAG 310332 Query 21411 CTTCAACAATTATATTTATTA---TCCTAGATGTACTAGGGGGATACAATAAT-TGTTTA 21466 | | | |||||| | | ||| |||| | | | || || | |||||| Sbjct 310333 CATTGATAATTATTTCTTTTACTTTCCT-----TCCGAAGGTTTGTGAAGCAGGTGTTTA 310387 Query 21467 AACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAA 21526 ||||| | || ||||| ||||| || ||||| ||||| || || || | |||||| ||| Sbjct 310388 AACATGAGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAA 310447 Query 21527 AATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCT 21586 ||||| | || ||||| ||||||| || || | ||| || || || ||||| | || Sbjct 310448 AATGTGAGGCCAGGCATCAATCCTCATTTCTTGAGCCAGAAGATGGATGCAAAAGAACCA 310507 Query 21587 GAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCT 21646 |||||||| || || || || || ||||| || || | |||| || || ||| |||| Sbjct 310508 GAAAAGAAGATTCCTTCTACTGCTGCAAAGGCTACAACATGTTCTCCATAGGTAACTTCT 310567 Query 21647 TTATCCAATATCCATTTTTCTGCCCATTTTGCCTT-TTCTTTAATACAATCAATTGTATC 21705 || | | ||||| | ||||| | |||||| |||||| | ||| ||||| || Sbjct 310568 TTGTTCCCAATCCAATGCAAGGCCCAGTCTGCCTTCTTCTTT-ACGCAAGGCATTGTTTC 310626 Query 21706 AATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNN 21765 ||| || || || ||| | |||| | |||| | ||| Sbjct 310627 AATTGCATTGAAGAGAAATTCCCTTTCTTTGGAATCGTTAATGTAAGTGTTGATAAGGAG 310686 Query 21766 ACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825 |||||||||||||||||| || ||||| || || || || || || || || || | || Sbjct 310687 ACTATACATTTCAGAATGCATGTTTTCCATGGCAATTTGGAAGCCATAGAAGCAGCAGGC 310746 Query 21826 CTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATC 21885 || | | ||||| || |||| | | ||||||||| ||||||||| ||||| Sbjct 310747 TTCCGTAATCTGAACTTCTTGGCTAAATAGCTCCACCAAGTTTTGATTTACTATGCCATC 310806 Query 21886 ACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTT 21945 ||| || ||||| | || | | || | |||||||| || || | | || Sbjct 310807 ACTTGCTGCAAAGACAGCTAGAACATGTGATATAAAATCTCTCTCCTCA-GGCTTCGGGC 310865 Query 21946 TTTCCAAT-CTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAA 22004 || || | || | | || || || | ||| || || |||| |||||||||| || Sbjct 310866 TTCACAGTGCTGA-ATGTCCTTGGAAAGATCCACCTCCTCAGCTGTCCAAAAGGAAGACT 310924 Query 22005 TAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAA 22059 ||| || |||||||| ||| ||||||| ||| |||| ||||| || ||||| Sbjct 310925 CAGCTTTCTTATACATCTGCCAAATATCATGGTATTTTATAGGAAAGATGACAAA 310979 >seq250257 Length=281617 Score = 194 bits (214), Expect = 2e-44 Identities = 585/898 (65%), Gaps = 16/898 (2%) Strand=Plus/Plus Query 21168 ttGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTC 21227 ||||||| | |||||| ||||||| || | |||| || || || || || ||||| Sbjct 103138 TTGACATCACTCCCATCCTTTGATACTCGCCTGCTCTCTTCTCAAAGAAGTTGGTCTT-- 103195 Query 21228 CTTCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTAC 21287 |||| || ||| ||| |||| ||||| ||||| || | | || | || | Sbjct 103196 ---CCAACGAAATATTCTCCGTAAAGTCAAAGGGATTCTCCACTCTGAAAACCTTGCTGA 103252 Query 21288 AACCCAGTTCTGATAATAA-TCTATCTGCTACAAATTCTATATATTGACACATTAATTCA 21346 |||||||||| | ||| ||| ||||| || ||||| || || || |||||| Sbjct 103253 AACCCAGTTCC-AGCCTAAGTCTGTCTGCCACGAATTCAATGTACTGCTTCATTAAAGTG 103311 Query 21347 CAATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAG 21406 |||||||| || |||| || ||||| | || | | | || | |||||| Sbjct 103312 CAATTCATTCCAATCAGCTTCACAGGCAAGGCCTCCATAAGGAACTCCTGTTCTATCCTA 103371 Query 21407 ACGGCTTCAACAATTATATTTATTATCCTAGATGTACTAGGGGGATACAAT--AATTGTT 21464 || || | | |||||| | | ||| || ||| | | || | | | |||| Sbjct 103372 ACAGCATTGATAATTATTTCTTTTACTCTC--TGTTCCAAAGGCTTGTGAAGCAGGTGTT 103429 Query 21465 TAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAG 21524 | ||||| | | ||| | | || || ||||||||||| || || || | |||||| | Sbjct 103430 TGAACATGAGGTAGGCAGACTTGCAGTGTAAACCTTCATCTCTGCTAATAAGTTCATTGG 103489 Query 21525 AAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTC 21584 ||||||| | || ||||| | ||||| || || | ||| || || || ||||| | Sbjct 103490 AAAATGTGAGGCCAGGCATCAGTCCTCATTTCTTGAGCCAGAAGATGGATGCAAAAGAGT 103549 Query 21585 CTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATT 21644 | |||||||| || || || || || ||||| || | | | ||| || || |||| || Sbjct 103550 CAGAAAAGAAGATTCCTTCTACTGCTGCAAAGGCTATGACACATTCTCCATAGGTAGCTT 103609 Query 21645 CTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTT-TTCTTTAATACAATCAATTGTA 21703 |||| ||| ||||| ||||| | |||||| ||||||| || || | | Sbjct 103610 CTTTGTCCCCAATCCAACGCAAGGCCCAGTCTGCCTTCTTCTTTACGCAAAACA-TCATT 103668 Query 21704 TCAATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNN 21763 ||||| || || |||||| | |||| | ||| | ||| Sbjct 103669 TCAATTGCATTGAAAAGAAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGG 103728 Query 21764 NNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTT 21823 ||||||||||||||||||||| ||||| || || || || || || || ||||| | Sbjct 103729 AGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGG 103788 Query 21824 GCCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCA 21883 || |||| | ||||| || | |||||| | ||||||||||||||||||| ||| Sbjct 103789 GCTTCTGTAATCTGAACTTCTTGACTAAATCGCTCCACCAAGTTTTCATTTACTATGCCA 103848 Query 21884 TCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT 21943 ||| || ||||| || || | | || | ||||||||||| || | | | | Sbjct 103849 TCATCTGCTGCAAAGAAAGCTAGAACATGTGATATAAAATATCTCTCCTCAGGCTTCAGG 103908 Query 21944 TTTTTCCAAT-CTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGC 22002 || ||| | || | | || || || | ||| || || ||| | |||||||| ||| Sbjct 103909 GCTTCCCAGTGCTGA-ATGTCCTTGGAAAGATCCACCTCCTCAACTATCCAAAAGGAAGC 103967 Query 22003 AATAGCCTTT-TTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAA 22059 || ||| |||||||| ||||||||||| ||| || ||||| || ||||| Sbjct 103968 CTCCGCTTTTCTTATACATTTGCCAGATATCATGGTATTCAATAGGAAAGATGACAAA 104025 >seq48835 Length=336802 Score = 136 bits (150), Expect = 4e-27 Identities = 399/610 (65%), Gaps = 18/610 (3%) Strand=Plus/Plus Query 21457 TAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAA 21516 ||| | || |||||||| || |||| ||||| || | |||||||| || || || | Sbjct 232322 TAAGTATTGAAACATCAGGCAAACAAAGTCACAGTGAAGCCCTTCATCTCTGCTGATGAG 232381 Query 21517 TTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGC 21576 |||| | ||||| || | || ||||| | ||||| || |||||||| ||||| | || Sbjct 232382 TTCACTGGAAAAAGTGAGTCCAGGCATAAGACCTCTGTTCTTTAACCAGAATATAGCAGC 232441 Query 21577 AAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTA 21636 ||| | |||||| || ||||| || || | |||||||| || || | | ||| || | Sbjct 232442 AAAAGATCCTGAGAAAAAAATACCTTCTAGAGCAGCAAAGGCCACCACCCTTTCCCCAAA 232501 Query 21637 TGTAGATTCTTTATCCAATATC-CATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAAT 21695 ||||||| | |||| |||| || ||||| | ||| |||| |||| | Sbjct 232502 AGTAGATTTTCTATCTGCTATCACAAG-----GCCCAATCTGCTTTTTTCTTAACGTATG 232556 Query 21696 CAATTGTATCAATAGCTTTTAA-AAGATGAttt--ttttCATCTACATCGGTTATGNNNN 21752 ||||| || || || || || |||| ||| ||||| | ||| | ||| Sbjct 232557 GCATTGTTTCTATTGCATTAAATAAGA--ATTCCCTTTTCTTGGG-ATCTCTGATGTAAG 232613 Query 21753 NNNNNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGT 21812 ||||||||| || || || | ||| | || || ||||| || | Sbjct 232614 TGTCTATTAGCAAACTATACATCTCTGAGTGAACATTCTGGATGAGAATTTGAAAACCAT 232673 Query 21813 AAAAACATCTTGCCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCAT 21872 | ||||| | |||||||| || | ||| || || | |||||||||||| Sbjct 232674 AGAAACAGCGAGCCTCTGAGACCTGTAGCTCCTGGCTGAAGCGCTCCACCAAGTTTTCAT 232733 Query 21873 TTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGT 21932 |||| ||||||||||||| |||||||| || || | | |||||||| ||| | Sbjct 232734 TTACAGTTCCATCACTGGCTGCAAAAAAGGCTAAGACGTGAGAGATAAAATA--CTTC-T 232790 Query 21933 TATCTG--TTAA-TTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTG 21989 |||| |||| || ||||| | | ||| |||||||| || | ||||| | || Sbjct 232791 CTTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATAAGTCAGCCTCTTCTGCTG 232850 Query 21990 TCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAA 22049 |||| ||| || |||| ||||||||| |||| ||| | || | |||||| Sbjct 232851 TCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATAGCGGGGTACTGTGTTGGAA 232910 Query 22050 ATATTACAAA 22059 | || ||||| Sbjct 232911 AAATGACAAA 232920 Score = 86.0 bits (94), Expect = 7e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 21126 TTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTT 21185 |||| ||||| ||||| || | ||| ||||||||| ||| || ||||| | | | Sbjct 224351 TTTAGAAATCTGCATCCAAGGTGAAGACATTATCTGTGGTTTCTGCCATAACGGCAAAAT 224410 Query 21186 TTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATT 21245 ||||| || ||||| ||| || || |||||||| || || || || || || || Sbjct 224411 GCTGATACTCTGAAACTCATTTCTCAAAGAAATTTGTTTTCCCCTCTAAAGAAATGTTTT 224470 Query 21246 CCATAAAATCAAATGGATTTTC 21267 ||||||||||||| |||||||| Sbjct 224471 CCATAAAATCAAAGGGATTTTC 224492 >seq253765 Length=547980 Score = 134 bits (148), Expect = 1e-26 Identities = 574/897 (64%), Gaps = 22/897 (2%) Strand=Plus/Minus Query 21126 TTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTT 21185 |||| || |||||||| || | || ||| ||| | ||||||| | | ||| Sbjct 64346 TTTAGAAGTCAGCATCCAAGGTACAAGAATTTTCTATTGAACTTGACATCACCCACATCC 64287 Query 21186 TTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATT 21245 | ||||| ||| |||| || || | || || ||||| ||||| | || || | Sbjct 64286 TCTGATAC---CTA-CTCTCTTATCAGAGAAGTTGGTCTTCCCTTCTAGCAATGTATTCT 64231 Query 21246 CCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATA 21305 ||||||| ||||||||||| || | | || | || | |||||||| | | ||| Sbjct 64230 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCTGAAACCCAGTCCC-AGCATA 64172 Query 21306 ATCTA-TCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364 || | || || | ||||| || || || |||||| |||||||| || ||||| Sbjct 64171 ATTTTGTCAGCCATGAATTCAATGTACTGCTTCATTAAAGTGCAATTCATTCCAATCAAC 64112 Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATA 21424 || ||||| | || | | | || | |||||| || | | | |||||| Sbjct 64111 TTCACAGGCAAGGCCTCCATAAGGAATCCCTATTCTATCCTAACAGTATTGATAATTATT 64052 Query 21425 TTTATTATCCTAGATGTACT--AGGGGGATACAATAATTGTTTAAACATCAAACATGCAA 21482 | | | | || ||| || ||| | | || | ||| ||||| | || |||| Sbjct 64051 TCTTTAACTCTC--TGTTCTGAAGGTTTGTGAAGCAAGTATTTGAACATGAGGCAGGCAA 63994 Query 21483 AATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCA 21542 | | | || || || ||||| || | || |||||| | |||||||| | || |||| Sbjct 63993 AGTTGTAGTGTAAGCCCTCATCTCTGCCAATAAATTCACTGGAAAATGTGAGGCCTGGCA 63934 Query 21543 TTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCT 21602 | ||| ||| || || | ||| || ||||||||||| | |||||||||||| || || | Sbjct 63933 TCAATTCTCATTTCTTGAGCCAGAAGATTGACGCAAAAGATCCTGAAAAGAAGATTCCTT 63874 Query 21603 CAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATT 21662 | || || ||||| || | | ||||| | || |||| |||||| ||| ||| | | Sbjct 63873 CTACTGCTGCAAAGGCTATGACACGTTCTACATAGGTAGCTTCTTTGTCCTCAATCTAAT 63814 Query 21663 TTTCTGCCCATTTTGCCTT-TTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAAGA 21721 |||| | |||||| ||||| || || | ||| ||||| | || ||| Sbjct 63813 GCAAGACCCAGTCTGCCTTCCTCTTT-ATGCA---AGATGTTTCAATTACACCGAAGAGA 63758 Query 21722 TGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAA 21781 ||| || | | ||| | ||| ||| |||||| ||| Sbjct 63757 -AATTCCCTTTTTGTGGATCTTTAATGTAAGTGTTGTTAAGGAGACTGCACATTTTGGAA 63699 Query 21782 TGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAACC 21841 ||||| |||||||| || || || || || | ||||| | || |||| | |||||| Sbjct 63698 TGTATGTTTTCTATGGCAATTTGGAAGCCACAGAAACAGCAGGCTTCTGTAATCTGAACC 63639 Query 21842 TC--GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAA 21899 || || | ||| | | |||||||||||||||||| |||||| | | ||||| Sbjct 63638 TCATGGCTT--AATGGCTCCATCAAGTTTTCATTTACTATGCCATCATTTTCTGCAAAGC 63581 Query 21900 ATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTCCAAT-CTAAT 21958 | |||| |||| | ||||||||||| ||| | | | | || ||| | || | Sbjct 63580 AAGCCAGGATATGTGATATAAAATATCTTTCTTCAGGCTTCAGGGCTTCCCAGTACTGA- 63522 Query 21959 AAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTA 22015 | || || || |||||| || |||| |||||||||| |||| ||| || ||| Sbjct 63521 ATGTCCTTGGAACGATCTACCTCCTCAGCTGTCCAAAAGGTAGCCTCAGCTTTCTTA 63465 >seq166132 Length=57562 Score = 132 bits (146), Expect = 5e-26 Identities = 570/896 (64%), Gaps = 22/896 (2%) Strand=Plus/Minus Query 21168 ttGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTC 21227 ||||||| | |||||| | ||||| | | ||||| || || || || || || || | Sbjct 31429 TTGACATCACTCCCATCCTCTGATACTTGCCTACTCTCTTCTCAAAGAAGTTGGTTTTCC 31370 Query 21228 CTTCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTAC 21287 |||||| | |||| ||||| || ||||| ||||| || | | || | || | Sbjct 31369 CTTCCAGCAAAATAGTCTCCATTAAGTCAAAGGGATTCTCCATTCTGAAAACCTTGCTGA 31310 Query 21288 AACCCAGTTCTGATAATAA-TCTATCTGCTACAAATTCTATATATTGACACATTAATTCA 21346 |||||||||| | |||| ||| ||||| |||| ||| || || || |||||| Sbjct 31309 AACCCAGTTCC-AGCATAAGTCTGTCTGCCACAATTTCAATGTACTGCTTCATTAAAGTG 31251 Query 21347 CAATTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAG 21406 |||||| | || ||| || ||||| | || | | | || | |||||| Sbjct 31250 CAATTCGTTCCAGTCAGCTTCACAGGCAAGGCCTCCATAAGGAACTACCATTCTATCCTA 31191 Query 21407 ACGGCTTCAACAATTATATTTATTATCCTAGATGTACTAGGGGGATACAAT--AATTGTT 21464 || || | | |||||| | | ||| || ||| || | | || | |||| Sbjct 31190 ACAGCATTGATAATTATTTCTTTTACTCTC--TGTTCTGAAAGTTTGTAAGGCAGGTGTT 31133 Query 21465 TAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAG 21524 | ||||| | || ||| | || || ||||| |||| || || || |||||| | Sbjct 31132 TGAACATGAGGCAGGCAGCTTTGCAGTGTAAACCCCCATCTCTGCTAATACGTTCATTGG 31073 Query 21525 AAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTC 21584 ||||| | | || ||||| | | |||| || || | || || || || ||||| | | Sbjct 31072 AAAATATGAGGCCAGGCATCAGTTCTCTTTTCTTGAGCCGGAAGATCGATGCAAAAGAGC 31013 Query 21585 CTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATT 21644 | |||| || || || || || ||||| || | | |||| || || |||| || Sbjct 31012 C-----AGAAGATTCCTTCTACTGCTGCAAAGGCTATGACATGTTCTCCATAGGTAGTTT 30958 Query 21645 CTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTAT 21704 |||| ||| ||||| ||||| | |||||| ||||| | ||| ||| | Sbjct 30957 CTTTGTCCCCAATCCAACGCAAGGCCCAGTCTGCCTT--CTTTA-TGCAAGGCATTTCAA 30901 Query 21705 CAATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNN 21764 | ||| || || ||| | |||| | ||| | ||| Sbjct 30900 CTATA---TTAAAGAGAAATTCCCTTTCTTTGGAATCTTTAATGTAAGCATCGATAAGAA 30844 Query 21765 NACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTG 21824 ||||||||||||||||||||| ||||| || | || || || || || ||||| | | Sbjct 30843 GACTATACATTTCAGAATGTATGTTTTCCATGACAATTTGGAAGCCATAGAAACAACGGG 30784 Query 21825 CCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCAT 21884 | |||| | ||||| | |||| | | |||||||||||||||||| | |||| Sbjct 30783 CTTCTGTAATCTGAACTGCTTGTCTAAATTGCTCCGCCAAGTTTTCATTTACTGTGCCAT 30724 Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATT 21944 |||| || | ||| || ||||| | || | |||||| |||| || | | | | Sbjct 30723 CACTTGCTGTAAAGAAAGCCAAAACATGTGATATAAAGTATCTCTCTTCAGGCTTCAGGG 30664 Query 21945 TTTTCCA-ATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCA 22003 || ||| | || || || ||| | | | ||| | |||| |||||||||| ||| Sbjct 30663 CTTCCCAGAGCT-GTATGTCCTTTTAAAGACCTA---CCTCAGCTGTCCAAAAGGAAGCC 30608 Query 22004 ATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAA 22059 ||| || | |||||| ||| ||||||| ||| ||| ||||| || ||||| Sbjct 30607 TCAGCTTTCTCATACATCTGCCAAATATCATGGTATTCTATAGGAAAGATGACAAA 30552 >seq254358 Length=18439 Score = 105 bits (116), Expect = 7e-18 Identities = 507/808 (63%), Gaps = 48/808 (6%) Strand=Plus/Plus Query 21122 TTTATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCC 21181 || ||||| || |||||||| || | ||| ||| ||| ||||||| | |||| Sbjct 12189 TTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTCAAACTTGACATCACTCCC 12248 Query 21182 ATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATA 21241 || | ||||||| | | || || || ||||| | |||||| ||||||| ||| ||| Sbjct 12249 ATCCTCTGATAATTGCCTATTCCTTCCTCAAAAAAGTCTGTCTTCCCTTCCAGTGAAATA 12308 Query 21242 GATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGAT 21301 |||||||| |||||||||| || | | || | || || |||||||||||| Sbjct 12309 TTCTCCATAAAGCCAAATGGATTCTCTACTCTGAAAACCTTGTTGAAACCCAGTTCTGC- 12367 Query 21302 AATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATC 21361 || || ||||| | || || |||||| ||||||| || ||| Sbjct 12368 ------CT---TG-----AATTCAGTGTACTGCTTCATTAAAGTGTAATTCATTCCAATC 12413 Query 21362 AATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATT 21421 | || ||||| | || | || | || | |||||| | || | | |||| Sbjct 12414 AGCTTCACAGGCAAGGCCTCGGTAAGGAACTCCTATTCTATCCTAA--GCATTGATAATT 12471 Query 21422 ATATTTATTATCCTAGATGTACT--AGGGGGATACAATAATTGTTTAAACATCAAACATG 21479 || | | ||| ||| ||| || ||| | | | ||||| ||||| | || | Sbjct 12472 ATTTCTTTTACCCTC--TGTTCTGAAGGTTTGTGAAGCAGGTGTTTGAACATTAGGCAAG 12529 Query 21480 CAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGG 21539 |||| | || || ||||| ||||| || || || | |||| | |||||||||| || | Sbjct 12530 CAAAGTTGCATTGTAAACCCTCATCTCTGCTAATAAGTTCAATGGAAAATGTTAGGCCAG 12589 Query 21540 GCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGC 21599 |||| ||||||| || || | ||| || || || || Sbjct 12590 GCATCAATCCTCATTTCTTGAGCCAGAAGATCGATT---------------------TGT 12628 Query 21600 CCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCC 21659 || | || ||||| || || | || ||||| || |||| || ||| ||| |||| Sbjct 12629 TCT--ATTGCTGCAAAGGCTACAACACGGTCACCATAGGTAGCTTATTTGTCCCCAATCC 12686 Query 21660 ATTTTTCTGCCCATTTTGCCTT-TTCTTTAATACAATCAATTGTATCAATAGCTTTTAAA 21718 ||||||| |||||| ||||||| | || ||||| ||||| || || || Sbjct 12687 GACACAAGGCCCATTCTGCCTTATTCTTTAC-AGAAGGCATTGTTTCAATTGCATTGAAG 12745 Query 21719 AGATGAtttttttCATCTACATCGGTTA-TGNNNNNNNNNNNNNNNNNACTATACATTTC 21777 ||| ||| || | | | ||| || | |||||||||| Sbjct 12746 AGAA-ATTGCCATCCTTTGGAATTTTTAATGTAAGTATCAATAAGGAGATTATACATTTC 12804 Query 21778 AGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTG 21837 ||||||||| ||||| || || || || || || || | ||| | || |||| | || Sbjct 12805 AGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAGACAGCAGGCTTCTGTAATCTG 12864 Query 21838 AACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAA 21897 ||| || ||||| | ||||||||||||| ||||| |||||||| || |||| Sbjct 12865 AACTTCTTGGCTAAATCATGCCACCAAGTTTTCATTCACTATGCCATCACTTGCTACAAA 12924 Query 21898 AAATGCCAATATATTTTTTATAAAATAT 21925 || |||| | || | |||||||||| Sbjct 12925 GAAAGCCAGAACATATGATATAAAATAT 12952 >seq90388 Length=37509 Score = 86.0 bits (94), Expect = 7e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 21126 TTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTT 21185 |||| ||||| ||||| || | ||| ||||||||| ||| || ||||| | | Sbjct 14286 TTTAGAAATCTGCATCCAAGGTGAAGACATTATCTGTGGTTTCTGCCATAACGGCAAAAC 14227 Query 21186 TTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATT 21245 |||||| || ||||| ||| || || |||||||| || || || || || || || Sbjct 14226 GTTGATACTCTGCAACTCGTTTCTCAAAGAAATTTGTTTTCCCCTCTAAAGAAATGTTTT 14167 Query 21246 CCATAAAATCAAATGGATTTTC 21267 ||||||||||||| |||||||| Sbjct 14166 CCATAAAATCAAAGGGATTTTC 14145 >seq261563 Length=484664 Score = 82.4 bits (90), Expect = 8e-11 Identities = 202/298 (68%), Gaps = 10/298 (3%) Strand=Plus/Plus Query 21766 ACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825 ||| ||||| | || || | ||| || || || ||||| | || ||||| | | Sbjct 278437 ACTGTACATCCCTGAGTGAACATTCTCAATGAGAATTTGAAAAC--TATAAACAGCGAGA 278494 Query 21826 CTCTGAACATTGAACCT-CGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCAT 21884 ||||| | | || |||| | | |||||| | | |||| |||||||||| ||||||| Sbjct 278495 CTCTGGAAACTGTACCTTCTGGCTAAAATGCTCCA-CCAAATTTTCATTTAAAATTCCAT 278553 Query 21885 CACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTG--TTAA 21942 |||||| |||||||| || || || | |||||||| ||| | |||| |||| Sbjct 278554 CACTGGTTGCAAAAAAGGCTAAAATGTGAGAGATAAAATA--CTTC-TCTTCTGATTTAA 278610 Query 21943 -TTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAG 22001 || ||||| | | ||| |||||||| | || ||||| | |||||| ||| | Sbjct 278611 GCTTGTTCCAGTGAGGGAGATCCTTTGATAAGTTAACCTCTTCTGCTGTCCAGAAGGATG 278670 Query 22002 CAATAGCCTTTTTATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAA 22059 |||| ||||||||| |||| |||||| || |||||||| || ||||| Sbjct 278671 TCTGTGCCTGTTTATACATTTTCCAAATATCAAGGTACTGGATTGGAAAGATGACAAA 278728 >seq238623 Length=17887 Score = 82.4 bits (90), Expect = 8e-11 Identities = 116/161 (72%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 21766 ACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGC 21825 |||||||||||| |||||||| ||||| || || || || || || || ||||| | || Sbjct 14094 ACTATACATTTC-GAATGTATGTTTTCCATAGCAATTTGGAAGCCATACAAACAGCCGGC 14036 Query 21826 CTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATC 21885 |||| | ||||| | | | |||| | ||||||||||||||||| ||||| Sbjct 14035 TTCTGTAATATGAACTTGGCTA---AATCACTCCATGAAGTTTTCATTTACTATGCCATC 13979 Query 21886 ACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATC 21926 ||| || ||||| || ||| | || | |||||||| || Sbjct 13978 ACTTGCTGCAAAGAAAGCCGGGACATGTGATATAAAATCTC 13938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530111725064160