Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq251325 91.5 1e-13 >seq251325 Length=352111 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||| ||||| | ||||| | | |||||| ||||| || | || || ||| Sbjct 311307 AAGATGCAGATTTTCATAAAAACTCCGATGGGAAAGACCATCACTCTTGAGGTTGAATCC 311248 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCG--ATAAAGAAGGCGTCCCCGTTG 115400 || || | | | | |||||| || || ||| |||||||||| | || || Sbjct 311247 TCAGATACAATAGAAAATGTAAAAGCCAAGAT--CCGGAATAAAGAAGGAATTCCTCCTG 311190 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 |||| || ||||| || | ||| ||||| ||| | ||||||| || || | || | Sbjct 311189 ATCAACAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACT 311130 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGA 115501 | ||||||||||| ||||||||| | ||||| ||||||||| Sbjct 311129 ACAACATTCAAAAGGAGTCTACTCTTCATATTGTGTTGAGA 311089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423949100834080