Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq261730 84.2 2e-11 seq262164 82.4 6e-11 >seq261730 Length=739691 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 33915 CAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCGTC 33974 || ||| |||||||| ||| |||||| ||||||||||| || | ||| || |||| Sbjct 78739 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCGTC 78680 Query 33975 GTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 |||| ||||||||| ||||| ||||| | ||||||||| Sbjct 78679 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATC 78641 >seq262164 Length=887232 Score = 82.4 bits (90), Expect = 6e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 33914 GCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCGT 33973 ||| ||| ||||||||| || |||||| ||||||||||| || | ||| || | | Sbjct 793351 GCAACACAAGATGAAGCATGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCAT 793292 Query 33974 CGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | |||| ||||||||| ||||| ||||| | ||||||||| Sbjct 793291 CTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATC 793252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395760249245368