Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq237447 87.8 2e-12 >seq237447 Length=29837 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || || || |||||||| ||||| || || || |||||||| || || || ||| Sbjct 13458 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAT 13399 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || ||| |||| ||| ||||| || | |||| || ||||| || || || Sbjct 13398 AAAGTACGTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGTCTCTGCTGATCAGGATGA 13339 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || ||||| ||||| || || || ||| | |||| || | || | || || Sbjct 13338 ATTCCTTCCTTATCCTGGATCTTGGCTTTCACATTTTCTGTTGTACCCGAGGGTTCAACC 13279 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || ||||| | || || || || || |||||||||||||| |||||| Sbjct 13278 TCAAGAGTGATGGTCTTTCCTGTCAGGGTTTTTACAAAAATCTGCATC 13231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450482864636640