Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq251307 111 2e-19 >seq251307 Length=851161 Score = 111 bits (122), Expect = 2e-19 Identities = 217/321 (68%), Gaps = 0/321 (0%) Strand=Plus/Minus Query 1881 TCCCAAACCAGCTCCACCCCGCTGATCGTGAATGGGGTGCTCGGGGAGTCCGTAACACTG 1940 || |||| ||| || ||||| |||| |||| ||| | || || ||| | ||||| || Sbjct 753916 TCACAAAGCAGTTCAACCCCATTGATGATGAACGGGATTCTGGGAGAGACAGTAACTCTT 753857 Query 1941 CCCCTGGAATTTCCCGCGGGCGAGAAGATCAAGTCCATCACCTGGCACTACAACGGCACC 2000 |||||| | | ||| | || ||| | ||||||| ||||||||||| |||||| || | Sbjct 753856 CCCCTGAAGTCTCCTGAAGGAGAGGAAATCAAGTACATCACCTGGCTCTACAATGGAATG 753797 Query 2001 TCCATCGCCTTTATTGCCCCCTCGGAGGCCAAGAGCCCCCAGATCCACCTAACCAATCCG 2060 || || ||||| || || || | || || | ||| | | || |||| Sbjct 753796 TCTATTGCCTTCATAAAGCCAAGTGAAACAGGAAGTCCGCTAATCGAGGTGACTGATCCT 753737 Query 2061 AAACTGGGCAAGCGACTCAACTTCACGCAGTCCTACTCCCTACAACTGAGCAACCTAGAG 2120 |||| | ||||| | | |||||| | |||||||||| | || || |||||||| Sbjct 753736 AAACGAAGAGAGCGATTGACCTTCACCCTGTCCTACTCCTTGCAGCTCAGCAACCTGACA 753677 Query 2121 ATGGAAGACACCGGGTCCTACAGTGCCCTGATGTCCTCCGAGACCACAGTTAACGTTTCC 2180 |||| |||||| || | || |||||| ||| |||| | | | | | || ||| Sbjct 753676 ATGGCAGACACAGGATTTTATGGTGCCCAGATAACCTCAAAAAGCTCTACAACTGTATCC 753617 Query 2181 AGCTACACGCTGAGGATCTTC 2201 ||||| |||||||||||| Sbjct 753616 TATTACACTCTGAGGATCTTC 753596 Score = 89.7 bits (98), Expect = 6e-13 Identities = 131/184 (71%), Gaps = 10/184 (5%) Strand=Plus/Minus Query 2254 GGATCTGCGAGATCCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCA 2313 ||| ||| ||||||||||||||||| ||||| ||| || | |||||| ||||||||| Sbjct 750272 GGACCTGTGAGATCCATCTGACCTGCTCTGTGGAGAATACAAATGACTCTGTCTCCTTCA 750213 Query 2314 AATGGGAGGCCTTGGGCAAG--------ACGCTTCTACGCGAGCCCAACCTCACGACCTC 2365 ||| | ||| || ||| || | || | | || | ||| |||| | ||| Sbjct 750212 CCTGGCATCACTTAGGAAAGCAAATATCAC-CATCCA-GGGAACTAAACATCACCATCTC 750155 Query 2366 CTGGGACCCCAGGAACAGCAGTGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAG 2425 || | |||| | ||| |||||| || |||||||| ||||| || || ||| |||| || Sbjct 750154 CTTGAACCCTAAGAATTCCAGTGAACATAACTACACCTGCATGGCTGAGAACCCTGTCAG 750095 Query 2426 CAAT 2429 |||| Sbjct 750094 CAAT 750091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627166574492640