Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq251882 244 9e-60 seq205975 244 9e-60 seq261591 150 1e-31 seq250505 150 1e-31 seq261394 147 2e-30 seq257211 145 6e-30 seq258222 143 2e-29 seq252517 127 2e-24 seq76734 107 2e-18 seq252671 102 7e-17 seq263908 100 2e-16 seq14725 95.1 1e-14 seq253235 93.3 3e-14 seq238652 93.3 3e-14 seq261392 91.5 1e-13 seq253611 91.5 1e-13 seq239629 89.7 4e-13 seq238896 89.7 4e-13 seq181268 87.8 1e-12 seq257204 86.0 5e-12 seq43875 86.0 5e-12 >seq251882 Length=196254 Score = 244 bits (270), Expect = 9e-60 Identities = 474/695 (68%), Gaps = 16/695 (2%) Strand=Plus/Plus Query 29763 TGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAG 29822 ||||| || ||||| || || | || |||||| | ||||| | | | ||||| ||| Sbjct 179215 TGTGGTAA--GGTCTTGGTTCTCGCTGAAGCTGAATTTTCAGTGCCTTGATGTGATTCAG 179272 Query 29823 GTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 29882 ||| | || || | || || ||||| || || || | || || || | ||| Sbjct 179273 GTAAATATGTGC-------AAAGTATGTACAAAGTCACCTGGCTTCAGGCCTGTAATGTG 179325 Query 29883 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCAT 29942 | |||||||| || || |||| |||||||||||||| || | || || | |||| Sbjct 179326 CCCGATCATGTAGGTAAGCAGAGCATAGCTGGCGATGTTGAAATGCACACCCAAGCCCAA 179385 Query 29943 GTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACA 30002 |||| |||| | ||||| ||||| |||||||||| | | || |||||| ||||| | Sbjct 179386 GTCCTCCGAACGTTGGTACAGCTGGCACGAGAGCT-GCTGCTGCCCACGTACAACTGGTA 179444 Query 30003 CATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAG-TCTTTGGGGTTCCAGGCGCACA 30061 | || ||||||||| || |||||||| || ||| ||||| || ||||| || |||| Sbjct 179445 GAGGGCGTGGCACGGCGGCAGAGCCATCAG----AAGATCTTTTGGATTCCAAGCACACA 179500 Query 30062 CGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGAT 30121 |||||| | ||||| | |||||| | |||| ||| | | || ||||| || | Sbjct 179501 TGATGATTCTTCTGTCATTGGGGTTGGTTTTGATTGTGTCAATCACCTTCTGCAGTTGGT 179560 Query 30122 CCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCC 30181 | | || || ||||| |||| ||| || |||| ||||| || |||||||||| Sbjct 179561 CTCCTCCTTGGCCTGAGTAATCTGAATTCACATCTTTGTATTCTGCCCCAAAATGCCTCC 179620 Query 30182 ACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGT 30241 ||| || || | ||| | |||| |||||| || || || ||| ||| || Sbjct 179621 GCTGAAAGCCAGAAACCAGGCCCAAGTCTCCTTCCTCTCTCATGGAGAATCCCAGACAGT 179680 Query 30242 CCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTT 30301 ||||||||| ||| || ||||||||||||| || || |||| |||| |||| Sbjct 179681 CCAAAAAGTTGTGGGATCCACTGGCGTCCCAGATTTTCACTTCCTTGGAAGAGATTTCTT 179740 Query 30302 TGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGA 30361 | | ||||||| || | || ||||||| || |||||||| || |||||||| || | Sbjct 179741 TAG-CATTGTGGATCCCTTAACAAACCACAACAACTCCTCCAAAACAGCCTTCCAGAATA 179799 Query 30362 CCCTCTTGGTCGTGAGGAGGGGAAACTGTCCCTTGAGGCCGTACATGGCCTGAGAACCAA 30421 | | ||||| || || || ||||||| | | |||| ||| ||||| | | Sbjct 179800 CACATTTGGTGGTCAGCAGAGGAAACTCATCTCTCAGGCTGTAGCGAGCCTGCAGGCTGA 179859 Query 30422 ACACGGACAAGACTCCCGTGCCCGTCCTGTCTCCC 30456 ||||||||| | | ||||| || | ||| ||| Sbjct 179860 ACACGGACAGGGTGCGGGTGCCAGTGCAGTCCCCC 179894 >seq205975 Length=138355 Score = 244 bits (270), Expect = 9e-60 Identities = 475/694 (68%), Gaps = 18/694 (3%) Strand=Plus/Minus Query 29767 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 29826 ||||||| ||| | || | || |||||| | ||||| | ||| | ||||| | |||| Sbjct 52432 GGAAAGG-TCTCGATTCTCGCTGCAGCTGAATTTTCAGTGCTTCAATGTGATTCCGGTAA 52374 Query 29827 ACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCC 29886 | || || ||||||| || || ||||| || || || | || || ||| ||| || Sbjct 52373 ATTTGTGCATCTCCCAAAGTATGCACAAAGTCACCTGGCTTCAGGCCCCTGATGTGTGCG 52314 Query 29887 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT--TAAAGGGTACCCCGAGCCCCATGT 29944 |||||| | || | || | || | ||||| ||| | || || | ||||| ||||||| Sbjct 52313 ATCATGCAGTTGCGCAGGGCGTGGTTGGCGGTGTGTTGAAAGGCAGGCCGAGGCCCATGT 52254 Query 29945 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACA 30004 | || ||| |||||| ||||| ||||||||||| | | || | | | ||||| || | Sbjct 52253 CTCCTGACTGCTGGTACAGCTGGCACGAGAGCTCACTGCTGCCCCTGGAGAACTGGCAGA 52194 Query 30005 TGGTGTGGCACGGAGGAAGAGCCAT--GAGGCCCAAG-TCTTTGGGGTTCCAGGCGCACA 30061 || |||||| || | || || |||| ||| ||||| || ||||| || || | Sbjct 52193 AGGCGTGGCATGGCAGCAGCATTATCAGAGG---AAGATCTTTTGGATTCCAAGCACAAA 52137 Query 30062 CGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGAT 30121 |||||| | || | | |||||| | |||| ||| | | ||||||||||| | Sbjct 52136 TGATGATTCTTCTATAGTTGGGGTTGGTTTTGATTGTGTCAATCACCTTTTGCAGCTGGT 52077 Query 30122 CCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCC 30181 | | | || |||| |||| || | || |||| |||||||| |||||||||| Sbjct 52076 CTTCTCGTTGGCCTAAGTAATCTGAATTCCTATCTTTGTATTCTGCTCCAAAATGCCTCC 52017 Query 30182 ACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGT 30241 ||| || || || ||||| |||| |||||| |||| || ||| ||| ||| Sbjct 52016 CCTGAAAACCATAAACCGGGCCCAAGTCTCCTTCTTTGGTGGA---GAATCCCAGGCTGT 51960 Query 30242 CCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTT 30301 |||||||||| | ||| || |||||||| |||| || || || || ||||| |||| Sbjct 51959 CCAAAAAGTCGCGGGATCCAGTGGCGTCCTAGATTTTCACTCCTTTGGAAGAGAGGTCTT 51900 Query 30302 TGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGA 30361 | | ||||| || || ||| |||||||||| |||||||| || ||||||| || | Sbjct 51899 TAGCATTTGTAGATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCCTTCCAGAATA 51840 Query 30362 CCCTCTTGGTCGTGAGGAGGGGAAAC---TGTCCCTTGAGGCCGTACATGGCCTGAGAAC 30418 | | ||||| | || || |||||| | |||| |||| ||| | |||| | Sbjct 51839 CACGTTTGGTGATCAGCAGAGGAAACTCATCTCCC---AGGCTGTAGAGCGCCTACAGGC 51783 Query 30419 CAAACACGGACAAGACTCCCGTGCCCGTCCTGTC 30452 |||||||| ||| | || ||||| || | ||| Sbjct 51782 CAAACACGCACAGGGTGCCAGTGCCAGTGCAGTC 51749 >seq261591 Length=704352 Score = 150 bits (166), Expect = 1e-31 Identities = 191/259 (74%), Gaps = 8/259 (3%) Strand=Plus/Plus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||| ||||| ||||| || || || || | ||||| |||| || || |||||| | Sbjct 427916 ATGTGCTCCTTGTGGGGGTTCCTTGAGTTCTCGACTGAGAACTAAATTAATTCTGTCTTT 427975 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||| | |||||| || |||||||||||||| |||||||||||||| ||||||| || Sbjct 427976 TAAAGGCCGATTCTTCTCAGGGATGGAGAACCAGGTCTTTCTACCCATAATCACCAGATT 428035 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCA 112259 ||| || ||| |||||||| || | ||||| | | || | ||||| || || | Sbjct 428036 CTGTTTACCTTCTACTGAAGAAGTTGTGGTCATTCTTTGGAAATACTTAAATTCATTCCT 428095 Query 112260 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACA 112318 | ||||| |||||||||||||||| || || |||||||||||| ||||| ||| Sbjct 428096 GA-----GCAGG-GGCCACGGCAGATCTCCATTCTTGCCGATGCCCATGTTCTGG-GACA 428148 Query 112319 CGGCCACGATACCGTTCAG 112337 | || ||||| | ||| || Sbjct 428149 CAGCAACGATGCAGTTTAG 428167 >seq250505 Length=12927 Score = 150 bits (166), Expect = 1e-31 Identities = 191/259 (74%), Gaps = 8/259 (3%) Strand=Plus/Minus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||| ||||| ||||| || || || || | ||||| |||| || || |||||| | Sbjct 8618 ATGTGCTCCTTGTGGGGGTTCCTTGAGTTCTCGACTGAGAACTAAATTAATTCTGTCTTT 8559 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||| | |||||| || |||||| ||||||| |||||||||||||| ||||||| || Sbjct 8558 TAAAGGCCGATTCTTCTCAGGGATGTAGAACCAGGTCTTTCTACCCATAATCACCAGATT 8499 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCA 112259 ||| || ||| |||||||| || | ||||| | | || | ||||| || || | Sbjct 8498 CTGTTTACCTTCTACTGAAGAAGTTGTGGTCATTCTTTGGAAATACTTAAATTCATTCCT 8439 Query 112260 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACA 112318 | ||||| ||||||||||||||||||| || |||||||||||| ||||| ||| Sbjct 8438 GA-----GCAGG-GGCCACGGCAGATCTCCGTTCTTGCCGATGCCCATGTTCTGG-GACA 8386 Query 112319 CGGCCACGATACCGTTCAG 112337 | || ||||| | ||| || Sbjct 8385 CAGCAACGATGCAGTTTAG 8367 >seq261394 Length=468452 Score = 147 bits (162), Expect = 2e-30 Identities = 131/164 (80%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || || |||| ||| || |||||||| ||||| || | |||||||||||||| || || Sbjct 93278 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAAGGC 93337 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || || || |||||||||||||||| ||||| ||||||||||||||||| ||| || | Sbjct 93338 ACACCCAGGCCCATGTCCCCCGACCGTTGGTACAGCTGACACGAGAGCTCGCCGCTGCCC 93397 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032 ||||| ||||| || | || |||||||| || || ||||| || Sbjct 93398 ACGTAGAACTGGCAGAGGGCATGGCACGGCGGCAGCGCCATCAG 93441 Score = 111 bits (122), Expect = 1e-19 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 30159 GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30218 ||| ||||| || |||||||||||||| || || || ||||| |||| |||||| ||||| Sbjct 97241 GTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACCGGGCCCAAGTCTCCTTCTTC 97300 Query 30219 CCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 30278 ||| ||| ||| ||||||||||||| | ||| || ||||| |||||||| || Sbjct 97301 TCTGGTGGAGAATCCCAGGCTGTCCAAAAAGTCGCGGGATCCATTGGCATCCCAGATTTT 97360 Query 30279 TACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 || ||||| || || ||||| | |||||||| || Sbjct 97361 CACTCCCTTGGAAGAAAGTTCTTTAGCATTTGTGGATCC 97399 >seq257211 Length=1294500 Score = 145 bits (160), Expect = 6e-30 Identities = 190/259 (73%), Gaps = 8/259 (3%) Strand=Plus/Minus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||| ||||| ||||| || || || || | ||||| |||| || || |||||| | Sbjct 1076308 ATGTGCTCCTTGTGGGGGTTCCTTGAGTTCTCGACTGAGAACTAAATTAATTCTGTCTTT 1076249 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||| | |||||| || |||||||||||||| |||||||||||||| ||||||| || Sbjct 1076248 TAAAGGCCGATTCTTCTCAGGGATGGAGAACCAGGTCTTTCTACCCATAATCACCAGATT 1076189 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCA 112259 ||| || ||| | |||||| || | ||||| | | || | || || || || | Sbjct 1076188 CTGTTTACCTTCTATTGAAGAAGTTGTGGTCATTCTTTGGAAATACTTGAATTCATTCCT 1076129 Query 112260 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACA 112318 | ||||| ||||||||||||||||||| || |||||||||||| ||||| ||| Sbjct 1076128 GA-----GCAGG-GGCCACGGCAGATCTCCGTTCTTGCCGATGCCCATGTTCTGG-GACA 1076076 Query 112319 CGGCCACGATACCGTTCAG 112337 | || ||||| | ||| || Sbjct 1076075 CAGCGACGATGCAGTTTAG 1076057 >seq258222 Length=100183 Score = 143 bits (158), Expect = 2e-29 Identities = 184/250 (74%), Gaps = 8/250 (3%) Strand=Plus/Plus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||| ||||| ||||| || || || || | ||||| |||| || || |||||| | Sbjct 1238 ATGTGCTCCTTGTGGGGGTTCCTTGAGTTCTCGACTGAGAACTAAATTAATTCTGTCTTT 1297 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||| |||||| || |||||||||||||| |||||||||||||| ||||||| || Sbjct 1298 TAAAGGCAGATTCTTCTCAGGGATGGAGAACCAGGTCTTTCTACCCATAATCACCAGATT 1357 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCA 112259 ||| || ||| |||||||| || | ||||| | | || | ||||| || || | Sbjct 1358 CTGTTTACCTTCTACTGAAGAAGTTGTGGTCATTCTTTGGAAATACTTAAATTCATTCCT 1417 Query 112260 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACA 112318 | ||||| ||||| ||||||||||||| || |||||||||||| ||||| ||| Sbjct 1418 GA-----GCAGG-GGCCACAGCAGATCTCCGTTCTTGCCGATGCCCATGTTCTGG-GACA 1470 Query 112319 CGGCCACGAT 112328 | || ||||| Sbjct 1471 CAGCAACGAT 1480 >seq252517 Length=296032 Score = 127 bits (140), Expect = 2e-24 Identities = 311/462 (67%), Gaps = 11/462 (2%) Strand=Plus/Minus Query 29765 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGT 29824 ||||||||| ||| ||||| | || |||||| | ||||| | | | ||||| || || Sbjct 235235 TGGGAAAGG-TCTTGGCTCTCACTGAAGCTGAATTTTCAGTGCCTTAATGTGATTCAAGT 235177 Query 29825 AGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTT-CTAGCCCGGTGACGTGA 29883 | || | | ||||||| || || |||| || || |||| | |||| | ||| || Sbjct 235176 AAACATCTTCATCTCCCAAAGTATGTGCAAAGTCACCTGGTTTCCAGCCTG-TGATATGT 235118 Query 29884 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 29943 | ||||| || | || | ||||||| ||||| || || || || || |||| Sbjct 235117 GTGATCATTTAGGCAAGCCTGGCATAGCTGGTAATGTTGAAAGGCACACCAAGGACCATT 235058 Query 29944 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACAC 30003 | || |||| |||||| |||| ||| ||| |||| | | || || ||||| || Sbjct 235057 CCTCCTGACCACTGGTACAGCTCACATGAGCGCTCACTACTGACCATGTTGAACTGGCAG 234998 Query 30004 ATGGTGTGGCACGG-AGGAAGAGCCATGA--GGCCCAAGTCTTTGGGG-TTCCAGGCGCA 30059 | |||||| || || || ||| ||| | | || ||| ||| || ||||| || || Sbjct 234997 AGGGTGTGCCATGGCAGCAAG-GCCTTCAAAGG---AAGAGTTTCTGGATTCCAAGCACA 234942 Query 30060 CACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTG 30119 || |||||| | |||| | | |||| | |||| ||| | | ||||||||||| Sbjct 234941 CATGATGATTCTTCTGTTATTGGTGTTGATTTTGATTGTGTCAATCACATTTTGCAGCTG 234882 Query 30120 ATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCT 30179 ||| || || || | || |||| |||| || |||| ||||| || || ||||| Sbjct 234881 ATCTACTCCTTGGCCTAAATAATCTGAATTCATTTCTTTGTATTCTGCCCCAAAGTGCCT 234822 Query 30180 CCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30221 ||| || || || || || || ||| || ||| ||||| || Sbjct 234821 CCAGTGAAAGCCATAAACTGGGTCCATGTATCCTTCTTCTCT 234780 >seq76734 Length=753 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||| ||||| ||||| || || || || | ||||| |||| || || |||||| | Sbjct 157 ATGTGCTCCTTGTGGGGGTTCCTTGAGTTCTCGACTGAGAACTAAATTAATTCTGTCTTT 98 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||| | |||||| || |||||| ||||||| |||||||||||||| ||||||| || Sbjct 97 TAAAGGCCGATTCTTCTCAGGGATGTAGAACCAGGTCTTTCTACCCATAATCACCAGATT 38 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 112231 ||| || ||| |||||||| || | ||||| Sbjct 37 CTGTTTACCTTCTACTGAAGAAGTTGTGGTCA 6 >seq252671 Length=96844 Score = 102 bits (112), Expect = 7e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||| ||||| ||||| || || || ||||| ||||| |||| || || ||||| | Sbjct 49663 ATGTGCTCCTTGTGGGGGTTCCTTGAGTTCCCTACTGAGAACTAAATTAATTCTGTCCTT 49722 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||| | |||||| || |||||||||||||| |||||||||||||| ||||||| || Sbjct 49723 TAAAGGCCAATTCTTCTCAGGGATGGAGAACCAGGTCTTTCTACCCATAATCACCAAATT 49782 Query 112200 CTGCTTGCCTCTGACTGAAGACGT 112223 | || ||| |||||||| || Sbjct 49783 CAATTTACCTTCTACTGAAGATGT 49806 >seq263908 Length=633351 Score = 100 bits (110), Expect = 2e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 112094 GGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCT 112153 |||| || || || || || ||||| || | || || ||||| | | ||| | ||||| Sbjct 564077 GGGGTTCCTTGAGTTCTCTACTGAGAACCAAATTAATTCTGTCCTTTAAAGGCCGATTCT 564136 Query 112154 TTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTGA 112213 | || || ||||||||||| ||||||||||||| ||||||| |||||||| ||| | Sbjct 564137 TCTCAGGCATGGAGAACCAGCTCTTTCTACCCATGATCACCAAATTCTGCTTACCTTCTA 564196 Query 112214 CTGAAGACGTAGCGGTCA 112231 ||||||| || | ||||| Sbjct 564197 CTGAAGAGGTTGTGGTCA 564214 >seq14725 Length=29362 Score = 95.1 bits (104), Expect = 1e-14 Identities = 170/246 (69%), Gaps = 8/246 (3%) Strand=Plus/Plus Query 112093 GGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTC 112152 ||||| | || || || || ||||| ||| || || ||||| | | ||| | ||| Sbjct 4423 GGGGGTTTCTTGAGTTCTCTACTGAGAACTTAATTAATTCTGTCCTTTAAAGGCCGGTTC 4482 Query 112153 TTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTG 112212 || || |||||||||||||||||||||||| |||| ||||||| || | || ||| Sbjct 4483 TTCTCAGGGATGGAGAACCAAGTCTTTCTATCCATAATCACCAAATTTTATTTACCTTCT 4542 Query 112213 ACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCAAAGTCTCGCAGGA 112272 |||||||| || | ||||| | | | || | || || || || || | || Sbjct 4543 ACTGAAGAGGTTGTGGTCATGTTTTGGAAATAGTTTAATTCATT------CCTGACCGGG 4596 Query 112273 TGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACACGGCCACGATACC 112331 |||| |||| ||||| || || | ||| |||||| ||||| ||| | | ||||| | Sbjct 4597 GGCCAGAGCAGGTCTCCATTATTGCTGATTCCCATGTTCTGG-GACATGACGACGATGCA 4655 Query 112332 GTTCAG 112337 ||| || Sbjct 4656 GTTTAG 4661 >seq253235 Length=97026 Score = 93.3 bits (102), Expect = 3e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 112114 CTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGAGAACCAA 112173 ||||| |||| || || |||||| | | ||| | |||||| || |||||||||||||| Sbjct 18918 CTGAGAACTAAATTAATTCTGTCTTTTAAAGGCCGATTCTTCTCAGGGATGGAGAACCAG 18977 Query 112174 GTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 |||||||||||||| ||||||| ||||| || ||| Sbjct 18978 GTCTTTCTACCCATAATCACCAGATTCTGTTTACCT 19013 >seq238652 Length=38978 Score = 93.3 bits (102), Expect = 3e-14 Identities = 179/259 (69%), Gaps = 9/259 (3%) Strand=Plus/Plus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||| ||||| | ||||| || || || || || | || || ||| | ||||| | Sbjct 6062 ATGTGCTCCTGT-GGGGGTTCCTTGAGTTCTCTACAAAGATTTAGGTTAACTCTGTCCTT 6120 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||| | |||||| || |||||||||||||||||||||||| |||| ||||||| || Sbjct 6121 TAAAGGCCGATTCTTCTCAGGGATGGAGAACCAAGTCTTTCTATCCATAATCACCAAATT 6180 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCA 112259 ||| || | | |||||||| | | ||||| | | || | || || || || | Sbjct 6181 CTGTTTACTTTCTACTGAAGAGGGTGTGGTCATTCTTTGGAAATACTTGAATTCATTCCT 6240 Query 112260 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACA 112318 | ||||| | | ||||| | | |||| || |||||||||||| ||||| ||| Sbjct 6241 GA-----GCAGG-GACTAGGGCAGGTTTTCGTTCTTACCGATGCCCATGTTCTGG-GACA 6293 Query 112319 CGGCCACGATACCGTTCAG 112337 | || | ||| | ||| || Sbjct 6294 CAGCGATGATGCAGTTTAG 6312 >seq261392 Length=788104 Score = 91.5 bits (100), Expect = 1e-13 Identities = 105/139 (76%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 112093 GGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTC 112152 ||||| || ||| | || || ||||| || | || || ||||| | | ||| |||| Sbjct 536574 GGGGGCTCCTTA-GTTCTCTACTGAGAACCAA-TTAATTCTGTCCTTTAAAGGCTGATTC 536517 Query 112153 TTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTG 112212 || || |||||||||||||| || ||||||||||| ||||||| ||||| || ||| Sbjct 536516 TTCTCAGGGATGGAGAACCAGGTTTTTCTACCCATAATCACCAAATTCTGTTTACCTTCT 536457 Query 112213 ACTGAAGACGTAGCGGTCA 112231 |||||||| || | ||||| Sbjct 536456 ACTGAAGAGGTTGTGGTCA 536438 >seq253611 Length=50723 Score = 91.5 bits (100), Expect = 1e-13 Identities = 208/307 (68%), Gaps = 7/307 (2%) Strand=Plus/Plus Query 30109 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCT 30168 |||||||| || || || | || || || |||| ||| ||| |||| |||| Sbjct 13619 TTTTGCAGTTGGTCTACTCTTTGGCCTGAATAATCTGAATCCATATCCTTGTATTCTGGC 13678 Query 30169 CCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCG 30228 |||| |||||||||||| || || || || || |||| || | ||||| ||| || Sbjct 13679 CCGAGATGCCTCCACTGAAAGCCATAAACTGGGCCCAAGT---CGTCTTCTCTG-GCAGA 13734 Query 30229 AAGCCCCTCTTGTCCAAAAAGT-CTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTT 30287 | ||| ||| ||||| | | || || |||| |||||||| ||||| ||||| Sbjct 13735 GAAACCCAGGCCTCCCGAAAGTCCACCAGATCCACTGGCATCCCAGATTTTTACTCCCTT 13794 Query 30288 CTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCC-ACGA 30346 || || ||||| |||||||| || || |||||||||| ||||||| | | Sbjct 13795 GGAAGACAGTTCTTTAACATTTGTGGATCCCTTGCTCAACCACAGCAACTCCTCCAAAAA 13854 Query 30347 CGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAACTGTCCCTTGAGGCCGTACA 30406 | |||||| || || ||||| || || ||| | ||| | | |||| ||| ||| | Sbjct 13855 CATTCTTCCAGAATACGCTCTTAGTGGTCAGGGGAGGACATTCATCCTTCAGGTTGTAGA 13914 Query 30407 TGGCCTG 30413 | ||||| Sbjct 13915 T-GCCTG 13920 >seq239629 Length=61467 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/222 (71%), Gaps = 10/222 (5%) Strand=Plus/Plus Query 112095 GGGAT-CTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCT 112153 ||||| | || || || || |||| |||| ||| || ||||| | | || | ||||| Sbjct 1745 GGGATTCCTTGAGTTCTCTAGTGAGAACTAAGTTAATTCTGTCCTTTAAGGGCCAATTCT 1804 Query 112154 TTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTT-GCCTCTG 112212 | || |||||||||||| | ||||||||||| || ||||||| |||| || ||||| Sbjct 1805 TCTCAGGGATGGAGAACAAGGTCTTTCTACCTATAATCACCAAATTCTATTTACCCTCT- 1863 Query 112213 ACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCAAAGTCTCGCAGGA 112272 |||||||| || | ||||| | |||| | || || || || | | || | ||| Sbjct 1864 ACTGAAGAAGTTGTGGTCATTCTTTGAAAATACTTGAATTCATTCC--TGACTGG--GGA 1919 Query 112273 TGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGG 112313 ||| ||||| ||||| | || | ||||| |||| ||||| Sbjct 1920 --CCAGGGCAGGTCTCCATGCTTGCTGATGCTCATGTTCTGG 1959 >seq238896 Length=8276 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/222 (71%), Gaps = 10/222 (5%) Strand=Plus/Minus Query 112095 GGGAT-CTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCT 112153 ||||| | || || || || |||| |||| ||| || ||||| | | || | ||||| Sbjct 270 GGGATTCCTTGAGTTCTCTAGTGAGAACTAAGTTAATTCTGTCCTTTAAGGGCCAATTCT 211 Query 112154 TTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTT-GCCTCTG 112212 | || |||||||||||| | ||||||||||| || ||||||| |||| || ||||| Sbjct 210 TCTCAGGGATGGAGAACAAGGTCTTTCTACCTATAATCACCAAATTCTATTTACCCTCT- 152 Query 112213 ACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCAAAGTCTCGCAGGA 112272 |||||||| || | ||||| | |||| | || || || || | | || | ||| Sbjct 151 ACTGAAGAAGTTGTGGTCATTCTTTGAAAATACTTGAATTCATTCC--TGACTGG--GGA 96 Query 112273 TGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGG 112313 ||| ||||| ||||| | || | ||||| |||| ||||| Sbjct 95 --CCAGGGCAGGTCTCCATGCTTGCTGATGCTCATGTTCTGG 56 >seq181268 Length=46976 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/210 (70%), Gaps = 7/210 (3%) Strand=Plus/Plus Query 112105 AGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATG 112164 || || || ||||| |||| || || ||||| | | ||| ||| || | |||||| Sbjct 40786 AGTTCTCTACTGAGAACTAAATTAATTCTGTCCTTTACAGGCTGATTATTCTTAGGGATG 40845 Query 112165 GAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTGACTGAAGACGTA 112224 |||||||| ||||||||| |||| ||||||| || || || | |||||||| || Sbjct 40846 GAGAACCAGGTCTTTCTATCCATAATCACCAAATTGTGTTTAAGTTCTACTGAAGAGGTT 40905 Query 112225 GCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCAAAGTCTCGCAGGATGCCACGGCAGA 112284 | ||||| | | || | || || ||||| | ||| || |||| ||||| Sbjct 40906 GTGGTCATTCTTTGGAAATACTTGAATTCTTTCCTGAGT------GGGGGCCAGGGCAGG 40959 Query 112285 TCTCCGTTGTTCCCGATGCCCATG-TCTGG 112313 |||||||| || | || ||||||| ||||| Sbjct 40960 TCTCCGTTCTTGCTGAGGCCCATGATCTGG 40989 >seq257204 Length=1338173 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 112093 GGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTC 112152 ||||| || || || || || | | |||| || || ||||| | | ||| | |||| Sbjct 589826 GGGGGTTCCTTGAGTTCTCTACCAACAACTAAATTAATTCTGTCCTTTAAAGGCCAATTC 589767 Query 112153 TTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTG 112212 || || |||||||||||||| || ||||| ||||| ||||||| ||||| || ||| Sbjct 589766 TTCTCAGGGATGGAGAACCAGGTGTTTCTCCCCATAATCACCAAATTCTGTTTACCTTCT 589707 Query 112213 ACTGAAGACGTAGCGGT 112229 |||||||| || | ||| Sbjct 589706 ACTGAAGAGGTTGTGGT 589690 >seq43875 Length=120574 Score = 86.0 bits (94), Expect = 5e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 112150 TTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 ||||| || |||||||||||||| |||||| ||||||||||||||| ||||| || ||| Sbjct 105233 TTCTTCTCAGGGATGGAGAACCAGGTCTTTTTACCCATTATCACCAAATTCTGTTTACCT 105292 Query 112210 CTGACTGAAGACGTAGCGGTCA 112231 |||||||| || | ||||| Sbjct 105293 TCCACTGAAGAGGTTGTGGTCA 105314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407277554414732