Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq260417 95.1 1e-14 seq251325 82.4 6e-11 >seq260417 Length=1194950 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || ||||| ||||| ||||| || ||||| || ||| |||| |||| | | Sbjct 431703 AATGCAGATCTTTGTGAAAACCTTAACGGGTAAAACTATCACCCTCGAGGTGGAGCCCAG 431762 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | || || ||||| || || |||||| | ||| || || Sbjct 431763 TGACACCATTGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCCCCTGACCA 431822 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||||| | || | ||| || || |||||||| || | | || || | |||||||| Sbjct 431823 GCAGAGATTGATCTTTGCCGGGAAGCAGCTGGAAGATGGCCGCACCCTGTCCGACTACAA 431882 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| || |||||||| || ||||| |||| || | | ||||||||| Sbjct 431883 CATCCAGAAGGAGTCCACCCTGCACCTGGTCCTGCGTCTTAGAGGGGGAA 431932 >seq251325 Length=352111 Score = 82.4 bits (90), Expect = 6e-11 Identities = 105/143 (73%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 107631 GTAAAACAAAAGATTGCCG--ATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTT 107688 |||||| ||||| ||| |||||||||| | || ||||| |||||||| || | Sbjct 311229 GTAAAAGCCAAGAT--CCGGAATAAAGAAGGAATTCCTCCTGATCAACAGAGACTGATCT 311172 Query 107689 ATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGT 107748 ||| || || || ||||| || | || || | |||||||||||||||||||||| Sbjct 311171 TTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTACAACATTCAAAAGGAGT 311112 Query 107749 CTACGTTGCACATGGTGTTGAGA 107771 |||| | || || ||||||||| Sbjct 311111 CTACTCTTCATATTGTGTTGAGA 311089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397568698990876