Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq251325 91.5 2e-13 >seq251325 Length=352111 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||| || ||||||||||| | ||||| || || ||| |||| || ||| | | | Sbjct 311303 TGCAGATTTTCATAAAAACTCCGATGGGAAAGACCATCACTCTTGAGGTTGAATCCTCA- 311245 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| || ||||||||||| || || | ||||||||| ||||| || |||||| Sbjct 311244 GATACAATAGAAAATGTAAAAGCCAAGATCCGGAATAAAGAAGGAATTCCTCCTGATCAA 311185 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || ||||| || ||||| || || ||| | || ||| | || || | || || || Sbjct 311184 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTACAAC 311125 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATT 146242 || ||||| || || ||| | ||| | || || Sbjct 311124 ATTCAAAAGGAGTCTACTCTTCATATTGTGTT 311093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783522090005280