Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq257400 100 3e-16 >seq257400 Length=867372 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 21114 ACTATGTTTCTAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGT 21173 ||||| || ||||| ||||| || | ||||||||| | ||| | || || |||| | Sbjct 284326 ACTATTCATCCAGCATATGGGGACCGACATGCGATGGCCTGGATCGGATCGTGGAGCGCT 284385 Query 21174 GTGAACTGCCAGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACA 21233 ||| ||||| || | || |||||||||||| | | ||||| ||||||||||| |||| Sbjct 284386 GTGCCCTGCCGGAAATGCACGTGGGCGACTGGATGCTGTTTGAGAACATGGGCGCGTACA 284445 Query 21234 GCTTGGTCAGCT-CTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATT 21292 | | | | ||| |||| ||||| |||||||||| | ||| | |||||||| || Sbjct 284446 CCGTAG-CTGCTGCTTCTACCTTCAACGGCTTCCAGAGGCCCACGATCCACTATGTGATG 284504 Query 21293 TC 21294 || Sbjct 284505 TC 284506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461986441197120