Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq243700 86.0 6e-12 >seq243700 Length=14829 Score = 86.0 bits (94), Expect = 6e-12 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAA-ATCGATCACGATCGAAGTCGAAG 25229 ||| ||||| | || |||||||| | || ||| | ||| || || | || || ||| Sbjct 8667 CAAGATGCAGATTTTCGTAAAAACCCTGACGGGACAGATC-ATGACTCTTGAGGTTGAAC 8725 Query 25230 CCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289 || ||||| || || | || ||| || || ||||| || || || || || | Sbjct 8726 CCTCGGATACAATAGAAAATGTGAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTG 8785 Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349 ||||||| ||||| || | | ||||||||||| ||||||| || | | | | || | Sbjct 8786 ATCAGCAGAGACTGATCTTTGCTGGCAAACAACTGGAAGATGGAAGTACTTTGTGTGACT 8845 Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 |||| |||||||| || ||||| ||| | | ||||| ||| Sbjct 8846 ACAACATTCAAAAGGAGTCCACTCTTCTTCTTGTGTTGAGA 8886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443597302730880