Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_027984.1 Length=57677 Score E Sequences producing significant alignments: (Bits) Value seq44583 306 1e-78 >seq44583 Length=10644 Score = 306 bits (338), Expect = 1e-78 Identities = 268/326 (82%), Gaps = 7/326 (2%) Strand=Plus/Plus Query 22123 AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG 22182 |||||||||||| ||||||||||||| || |||||||||||||||| | |||| |||||| Sbjct 8783 AATTACGCCCCGACCTGCCACTCATCTCAATACTGTTGTAATTCATAAGGCATACTGCCG 8842 Query 22183 ACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTG 22242 || || || ||||||||||||| |||||||||||||||| |||||||| | ||||||| Sbjct 8843 ACCTGAAATCCATCACAAACGG-ATGATGAACCTGAATCACCAGCGGCCTGTACACCTTG 8901 Query 22243 TCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTG 22302 ||||||||||||||||||| ||| |||| || |||| |||||| || |||||| ||||| Sbjct 8902 TCGCCTTGCGTATAATATTAGCCGATGGAGATTACGGAGGCGAATAAATTGTCCGTATTG 8961 Query 22303 GCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATA 22362 || ||| ||||||||| ||| |||| |||||| ||||||||||||||||||||||||| Sbjct 8962 ACCCCGTATAAATCAAACCTGCTGAATTTCACCCCGGGATTGGCTGAGACGAAAAACATA 9021 Query 22363 TTCTCAATAAACCCTTTAGGG-AAATAGGCCAGGTT-TTCACCGT-AACACG-CCACATC 22418 ||||| || ||||||||| ||||| |||| | || | || || | ||||||| Sbjct 9022 TTCTCCCTACACCCTTTAGCCCAAATA--CCAGATACTTTTCGGTGAATTCTACCACATC 9079 Query 22419 TTGCGAATATATGTGTAGAAACTGCC 22444 |||| || || || || || ||||| Sbjct 9080 TTGCAAAAATTAGTATAAAAGCTGCC 9105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183855430158312