Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq257400 86.0 7e-12 >seq257400 Length=867372 Score = 86.0 bits (94), Expect = 7e-12 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 59924 TAAACAAAAAG-CAGAATGGGCCATGCAGTGGAT--GAGTCCTGGA-GCATCATTTGCAC 59979 |||| || ||| |||| |||||| ||| ||||| | | | || || | | || | Sbjct 654342 TAAAGAAGAAGGCAGACTGGGCCTTGCGTTGGATTGGGGACAAAGAAGCTACCTATGGAG 654283 Query 59980 AACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTA 60039 ||||| || ||||||||||| || |||||||||||||| |||||||| || | | Sbjct 654282 AACGTGTCGTAGCTTTTGCAGCAGTAGAAGGAATCTTCTTTTCTGGCTCTTTTGCATCCA 654223 Query 60040 TTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTT 60099 | |||||||| || || || || | ||||| ||||| | || ||||| || || ||| Sbjct 654222 TCTTCTGGCTTAAGAAACGAGGATTGATGCCTGGCCTCACATTTTCCAATGAACTTATTA 654163 Query 60100 CCCGGGACGAGGG 60112 | | || ||||| Sbjct 654162 GCAGAGATGAGGG 654150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546679809408960