Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq251882 250 2e-61 seq205975 241 1e-58 seq261394 152 4e-32 seq261591 145 6e-30 seq250505 145 6e-30 seq257211 141 8e-29 seq258222 138 9e-28 seq252517 113 4e-20 seq76734 107 2e-18 seq252671 102 7e-17 seq263908 100 2e-16 seq253611 93.3 3e-14 seq253235 93.3 3e-14 seq261392 91.5 1e-13 seq14725 91.5 1e-13 seq239629 89.7 4e-13 seq238896 89.7 4e-13 seq238652 89.7 4e-13 seq181268 87.8 1e-12 seq257204 86.0 5e-12 seq43875 86.0 5e-12 >seq251882 Length=196254 Score = 250 bits (276), Expect = 2e-61 Identities = 424/610 (70%), Gaps = 7/610 (1%) Strand=Plus/Plus Query 29921 TGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAG 29980 || ||||| || || || | || || || | ||| | |||||||| || || |||| Sbjct 179291 TGTACAAAGTCACCTGGCTTCAGGCCTGTAATGTGCCCGATCATGTAGGTAAGCAGAGCA 179350 Query 29981 TAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGA 30040 |||||||||||||| || | || || | |||| |||| |||| | ||||| ||||| Sbjct 179351 TAGCTGGCGATGTTGAAATGCACACCCAAGCCCAAGTCCTCCGAACGTTGGTACAGCTGG 179410 Query 30041 CACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCC 30100 |||||||||| | | || |||||| ||||| | | |||||||||||| || |||||| Sbjct 179411 CACGAGAGCT-GCTGCTGCCCACGTACAACTGGTAGAGGGCGTGGCACGGCGGCAGAGCC 179469 Query 30101 ATGAGGCCCAAG-TCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTT 30159 || || ||| ||||| || ||||| || |||| |||||| | ||||| | ||||| Sbjct 179470 ATCAG----AAGATCTTTTGGATTCCAAGCACACATGATGATTCTTCTGTCATTGGGGTT 179525 Query 30160 GTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGC 30219 | | |||| ||| | | || ||||| || || | || || ||||| |||| Sbjct 179526 GGTTTTGATTGTGTCAATCACCTTCTGCAGTTGGTCTCCTCCTTGGCCTGAGTAATCTGA 179585 Query 30220 CCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAG 30279 ||| || |||| ||||| || |||||||||| ||| || || | ||| | |||| Sbjct 179586 ATTCACATCTTTGTATTCTGCCCCAAAATGCCTCCGCTGAAAGCCAGAAACCAGGCCCAA 179645 Query 30280 GTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGC 30339 |||||| || || || ||| ||| ||||||||||| ||| || |||| Sbjct 179646 GTCTCCTTCCTCTCTCATGGAGAATCCCAGACAGTCCAAAAAGTTGTGGGATCCACTGGC 179705 Query 30340 GTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAA 30399 ||||||||| || || |||| ||||| ||||| | ||||||| || | || || Sbjct 179706 GTCCCAGATTTTCACTTCCTTGGAAGAGATTTCTTTAG-CATTGTGGATCCCTTAACAAA 179764 Query 30400 CCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459 ||||| || |||||||| || |||||||| || || | ||||| || || || ||||| Sbjct 179765 CCACAACAACTCCTCCAAAACAGCCTTCCAGAATACACATTTGGTGGTCAGCAGAGGAAA 179824 Query 30460 CTGTCCCTTGAGGCCGTACCTGGCCTGAGAACCAAACACGGACAAGACTCCCGTGCCCGT 30519 || | | |||| ||| | ||||| | |||||||||| | | ||||| || Sbjct 179825 CTCATCTCTCAGGCTGTAGCGAGCCTGCAGGCTGAACACGGACAGGGTGCGGGTGCCAGT 179884 Query 30520 CCTGTCTCCC 30529 | ||| ||| Sbjct 179885 GCAGTCCCCC 179894 >seq205975 Length=138355 Score = 241 bits (266), Expect = 1e-58 Identities = 433/627 (69%), Gaps = 12/627 (2%) Strand=Plus/Minus Query 29840 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTAG 29899 ||||||| ||| | || | || |||||| | ||||| | ||| | || || | |||| Sbjct 52432 GGAAAGG-TCTCGATTCTCGCTGCAGCTGAATTTTCAGTGCTTCAATGTGATTCCGGTAA 52374 Query 29900 ACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCC 29959 | || || ||||||| | || ||||| || || || | || || ||| ||| || Sbjct 52373 ATTTGTGCATCTCCCAAAGTATGCACAAAGTCACCTGGCTTCAGGCCCCTGATGTGTGCG 52314 Query 29960 ATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT--TAAAGGGTACCCCGAGCCCCATGT 30017 |||||| | || | || | || | ||||| ||| | || || | ||||| ||||||| Sbjct 52313 ATCATGCAGTTGCGCAGGGCGTGGTTGGCGGTGTGTTGAAAGGCAGGCCGAGGCCCATGT 52254 Query 30018 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACA 30077 | || ||| |||||| ||||| ||||||||||| | | || | | | ||||| || | Sbjct 52253 CTCCTGACTGCTGGTACAGCTGGCACGAGAGCTCACTGCTGCCCCTGGAGAACTGGCAGA 52194 Query 30078 TGGCGTGGCACGGAGGAAGAGCCAT--GAGGCCCAAG-TCTTTGGGGTTCCAGGCGCACA 30134 ||||||||| || | || || |||| ||| ||||| || ||||| || || | Sbjct 52193 AGGCGTGGCATGGCAGCAGCATTATCAGAGG---AAGATCTTTTGGATTCCAAGCACAAA 52137 Query 30135 CGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGAT 30194 |||||| | || | | |||||| | |||| ||| | | ||||||||||| | Sbjct 52136 TGATGATTCTTCTATAGTTGGGGTTGGTTTTGATTGTGTCAATCACCTTTTGCAGCTGGT 52077 Query 30195 CCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCC 30254 | | | || |||| |||| || | || |||| |||||||| |||||||||| Sbjct 52076 CTTCTCGTTGGCCTAAGTAATCTGAATTCCTATCTTTGTATTCTGCTCCAAAATGCCTCC 52017 Query 30255 ACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGT 30314 ||| || || || ||||| |||| |||||| |||| || ||| ||| ||| Sbjct 52016 CCTGAAAACCATAAACCGGGCCCAAGTCTCCTTCTTTGGTGGA---GAATCCCAGGCTGT 51960 Query 30315 CCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTT 30374 |||||||||| | ||| || |||||||| |||| || || || || |||||| |||| Sbjct 51959 CCAAAAAGTCGCGGGATCCAGTGGCGTCCTAGATTTTCACTCCTTTGGAAGAGAGGTCTT 51900 Query 30375 TGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGA 30434 | | ||||| || || ||| |||||||||| |||||||| || ||||||| || | Sbjct 51899 TAGCATTTGTAGATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCCTTCCAGAATA 51840 Query 30435 CCCTCTTGGTCGTGAGGAGGGGAAACT 30461 | | ||||| | || || ||||||| Sbjct 51839 CACGTTTGGTGATCAGCAGAGGAAACT 51813 >seq261394 Length=468452 Score = 152 bits (168), Expect = 4e-32 Identities = 132/164 (80%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || |||| ||| || |||||||| ||||| || | |||||||||||||| || || Sbjct 93278 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAAGGC 93337 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || || |||||||||||||||| ||||| ||||||||||||||||| ||| || | Sbjct 93338 ACACCCAGGCCCATGTCCCCCGACCGTTGGTACAGCTGACACGAGAGCTCGCCGCTGCCC 93397 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105 ||||| ||||| || | ||| |||||||| || || ||||| || Sbjct 93398 ACGTAGAACTGGCAGAGGGCATGGCACGGCGGCAGCGCCATCAG 93441 Score = 116 bits (128), Expect = 3e-21 Identities = 121/159 (76%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 30232 GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30291 ||| ||||| || |||||||||||||| || || || ||||| |||| |||||| ||||| Sbjct 97241 GTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACCGGGCCCAAGTCTCCTTCTTC 97300 Query 30292 CCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 30351 ||| ||| ||| ||||||||||||| | ||| || ||||| |||||||| || Sbjct 97301 TCTGGTGGAGAATCCCAGGCTGTCCAAAAAGTCGCGGGATCCATTGGCATCCCAGATTTT 97360 Query 30352 TACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 || ||||| ||| || ||||| | |||||||| || Sbjct 97361 CACTCCCTTGGAAGAAAGTTCTTTAGCATTTGTGGATCC 97399 >seq261591 Length=704352 Score = 145 bits (160), Expect = 6e-30 Identities = 190/259 (73%), Gaps = 8/259 (3%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||| ||||| ||||| || || || || | ||||| |||| || || |||||| | Sbjct 427916 ATGTGCTCCTTGTGGGGGTTCCTTGAGTTCTCGACTGAGAACTAAATTAATTCTGTCTTT 427975 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||| | |||||| || |||||||||||||| |||||||||||||| ||||||| || Sbjct 427976 TAAAGGCCGATTCTTCTCAGGGATGGAGAACCAGGTCTTTCTACCCATAATCACCAGATT 428035 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCA 110558 ||| || ||| |||||||| || | ||||| | | || | ||||| || || | Sbjct 428036 CTGTTTACCTTCTACTGAAGAAGTTGTGGTCATTCTTTGGAAATACTTAAATTCATTCCT 428095 Query 110559 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACG 110617 | ||||| |||||||||||||||| || || |||||||||||| ||||| || Sbjct 428096 GA-----GCAGG-GGCCACGGCAGATCTCCATTCTTGCCGATGCCCATGTTCTGG-GACA 428148 Query 110618 CGGCCACGATACCGTTCAG 110636 | || ||||| | ||| || Sbjct 428149 CAGCAACGATGCAGTTTAG 428167 >seq250505 Length=12927 Score = 145 bits (160), Expect = 6e-30 Identities = 190/259 (73%), Gaps = 8/259 (3%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||| ||||| ||||| || || || || | ||||| |||| || || |||||| | Sbjct 8618 ATGTGCTCCTTGTGGGGGTTCCTTGAGTTCTCGACTGAGAACTAAATTAATTCTGTCTTT 8559 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||| | |||||| || |||||| ||||||| |||||||||||||| ||||||| || Sbjct 8558 TAAAGGCCGATTCTTCTCAGGGATGTAGAACCAGGTCTTTCTACCCATAATCACCAGATT 8499 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCA 110558 ||| || ||| |||||||| || | ||||| | | || | ||||| || || | Sbjct 8498 CTGTTTACCTTCTACTGAAGAAGTTGTGGTCATTCTTTGGAAATACTTAAATTCATTCCT 8439 Query 110559 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACG 110617 | ||||| ||||||||||||||||||| || |||||||||||| ||||| || Sbjct 8438 GA-----GCAGG-GGCCACGGCAGATCTCCGTTCTTGCCGATGCCCATGTTCTGG-GACA 8386 Query 110618 CGGCCACGATACCGTTCAG 110636 | || ||||| | ||| || Sbjct 8385 CAGCAACGATGCAGTTTAG 8367 >seq257211 Length=1294500 Score = 141 bits (156), Expect = 8e-29 Identities = 189/259 (73%), Gaps = 8/259 (3%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||| ||||| ||||| || || || || | ||||| |||| || || |||||| | Sbjct 1076308 ATGTGCTCCTTGTGGGGGTTCCTTGAGTTCTCGACTGAGAACTAAATTAATTCTGTCTTT 1076249 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||| | |||||| || |||||||||||||| |||||||||||||| ||||||| || Sbjct 1076248 TAAAGGCCGATTCTTCTCAGGGATGGAGAACCAGGTCTTTCTACCCATAATCACCAGATT 1076189 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCA 110558 ||| || ||| | |||||| || | ||||| | | || | || || || || | Sbjct 1076188 CTGTTTACCTTCTATTGAAGAAGTTGTGGTCATTCTTTGGAAATACTTGAATTCATTCCT 1076129 Query 110559 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACG 110617 | ||||| ||||||||||||||||||| || |||||||||||| ||||| || Sbjct 1076128 GA-----GCAGG-GGCCACGGCAGATCTCCGTTCTTGCCGATGCCCATGTTCTGG-GACA 1076076 Query 110618 CGGCCACGATACCGTTCAG 110636 | || ||||| | ||| || Sbjct 1076075 CAGCGACGATGCAGTTTAG 1076057 >seq258222 Length=100183 Score = 138 bits (152), Expect = 9e-28 Identities = 177/240 (74%), Gaps = 8/240 (3%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||| ||||| ||||| || || || || | ||||| |||| || || |||||| | Sbjct 1238 ATGTGCTCCTTGTGGGGGTTCCTTGAGTTCTCGACTGAGAACTAAATTAATTCTGTCTTT 1297 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||| |||||| || |||||||||||||| |||||||||||||| ||||||| || Sbjct 1298 TAAAGGCAGATTCTTCTCAGGGATGGAGAACCAGGTCTTTCTACCCATAATCACCAGATT 1357 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCA 110558 ||| || ||| |||||||| || | ||||| | | || | ||||| || || | Sbjct 1358 CTGTTTACCTTCTACTGAAGAAGTTGTGGTCATTCTTTGGAAATACTTAAATTCATTCCT 1417 Query 110559 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCT-GGACAC 110616 | ||||| ||||| ||||||||||||| || |||||||||||| ||| |||||| Sbjct 1418 GA-----GCAGG-GGCCACAGCAGATCTCCGTTCTTGCCGATGCCCATGTTCTGGGACAC 1471 >seq252517 Length=296032 Score = 113 bits (124), Expect = 4e-20 Identities = 308/462 (67%), Gaps = 11/462 (2%) Strand=Plus/Minus Query 29838 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGT 29897 ||||||||| ||| ||||| | || |||||| | ||||| | | | || || || || Sbjct 235235 TGGGAAAGG-TCTTGGCTCTCACTGAAGCTGAATTTTCAGTGCCTTAATGTGATTCAAGT 235177 Query 29898 AGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTT-CTAGCCCGGTGACGTGA 29956 | || | | ||||||| | || |||| || || |||| | |||| | ||| || Sbjct 235176 AAACATCTTCATCTCCCAAAGTATGTGCAAAGTCACCTGGTTTCCAGCCTG-TGATATGT 235118 Query 29957 GCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATG 30016 | ||||| || | || | ||||||| ||||| || || || || || |||| Sbjct 235117 GTGATCATTTAGGCAAGCCTGGCATAGCTGGTAATGTTGAAAGGCACACCAAGGACCATT 235058 Query 30017 TCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACAC 30076 | || |||| |||||| |||| ||| ||| |||| | | || || ||||| || Sbjct 235057 CCTCCTGACCACTGGTACAGCTCACATGAGCGCTCACTACTGACCATGTTGAACTGGCAG 234998 Query 30077 ATGGCGTGGCACGG-AGGAAGAGCCATGA--GGCCCAAGTCTTTGGGG-TTCCAGGCGCA 30132 | || ||| || || || ||| ||| | | || ||| ||| || ||||| || || Sbjct 234997 AGGGTGTGCCATGGCAGCAAG-GCCTTCAAAGG---AAGAGTTTCTGGATTCCAAGCACA 234942 Query 30133 CACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTG 30192 || |||||| | |||| | | |||| | |||| ||| | | ||||||||||| Sbjct 234941 CATGATGATTCTTCTGTTATTGGTGTTGATTTTGATTGTGTCAATCACATTTTGCAGCTG 234882 Query 30193 ATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCT 30252 ||| || || || | || |||| |||| || |||| ||||| || || ||||| Sbjct 234881 ATCTACTCCTTGGCCTAAATAATCTGAATTCATTTCTTTGTATTCTGCCCCAAAGTGCCT 234822 Query 30253 CCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCT 30294 ||| || || || || || || ||| || ||| ||||| || Sbjct 234821 CCAGTGAAAGCCATAAACTGGGTCCATGTATCCTTCTTCTCT 234780 >seq76734 Length=753 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||| ||||| ||||| || || || || | ||||| |||| || || |||||| | Sbjct 157 ATGTGCTCCTTGTGGGGGTTCCTTGAGTTCTCGACTGAGAACTAAATTAATTCTGTCTTT 98 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||| | |||||| || |||||| ||||||| |||||||||||||| ||||||| || Sbjct 97 TAAAGGCCGATTCTTCTCAGGGATGTAGAACCAGGTCTTTCTACCCATAATCACCAGATT 38 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 110530 ||| || ||| |||||||| || | ||||| Sbjct 37 CTGTTTACCTTCTACTGAAGAAGTTGTGGTCA 6 >seq252671 Length=96844 Score = 102 bits (112), Expect = 7e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||| ||||| ||||| || || || ||||| ||||| |||| || || ||||| | Sbjct 49663 ATGTGCTCCTTGTGGGGGTTCCTTGAGTTCCCTACTGAGAACTAAATTAATTCTGTCCTT 49722 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||| | |||||| || |||||||||||||| |||||||||||||| ||||||| || Sbjct 49723 TAAAGGCCAATTCTTCTCAGGGATGGAGAACCAGGTCTTTCTACCCATAATCACCAAATT 49782 Query 110499 CTGCTTGCCTCTGACTGAAGACGT 110522 | || ||| |||||||| || Sbjct 49783 CAATTTACCTTCTACTGAAGATGT 49806 >seq263908 Length=633351 Score = 100 bits (110), Expect = 2e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 110393 GGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCT 110452 |||| || || || || || ||||| || | || || ||||| | | ||| | ||||| Sbjct 564077 GGGGTTCCTTGAGTTCTCTACTGAGAACCAAATTAATTCTGTCCTTTAAAGGCCGATTCT 564136 Query 110453 TTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTGA 110512 | || || ||||||||||| ||||||||||||| ||||||| |||||||| ||| | Sbjct 564137 TCTCAGGCATGGAGAACCAGCTCTTTCTACCCATGATCACCAAATTCTGCTTACCTTCTA 564196 Query 110513 CTGAAGACGTAGCGGTCA 110530 ||||||| || | ||||| Sbjct 564197 CTGAAGAGGTTGTGGTCA 564214 >seq253611 Length=50723 Score = 93.3 bits (102), Expect = 3e-14 Identities = 190/278 (68%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 30182 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCT 30241 |||||||| || || || | || || || |||| ||| ||| |||| |||| Sbjct 13619 TTTTGCAGTTGGTCTACTCTTTGGCCTGAATAATCTGAATCCATATCCTTGTATTCTGGC 13678 Query 30242 CCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCG 30301 |||| |||||||||||| || || || || || |||| || | ||||| ||| || Sbjct 13679 CCGAGATGCCTCCACTGAAAGCCATAAACTGGGCCCAAGT---CGTCTTCTCTG-GCAGA 13734 Query 30302 AAGCCCCTCTTGTCCAAAAAGT-CTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTT 30360 | ||| ||| ||||| | | || || |||| |||||||| ||||| ||||| Sbjct 13735 GAAACCCAGGCCTCCCGAAAGTCCACCAGATCCACTGGCATCCCAGATTTTTACTCCCTT 13794 Query 30361 CTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCC-ACGA 30419 ||| || ||||| |||||||| || || |||||||||| ||||||| | | Sbjct 13795 GGAAGACAGTTCTTTAACATTTGTGGATCCCTTGCTCAACCACAGCAACTCCTCCAAAAA 13854 Query 30420 CGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGA 30457 | |||||| || || ||||| || || ||| | ||| Sbjct 13855 CATTCTTCCAGAATACGCTCTTAGTGGTCAGGGGAGGA 13892 >seq253235 Length=97026 Score = 93.3 bits (102), Expect = 3e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 110413 CTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGAGAACCAA 110472 ||||| |||| || || |||||| | | ||| | |||||| || |||||||||||||| Sbjct 18918 CTGAGAACTAAATTAATTCTGTCTTTTAAAGGCCGATTCTTCTCAGGGATGGAGAACCAG 18977 Query 110473 GTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 |||||||||||||| ||||||| ||||| || ||| Sbjct 18978 GTCTTTCTACCCATAATCACCAGATTCTGTTTACCT 19013 >seq261392 Length=788104 Score = 91.5 bits (100), Expect = 1e-13 Identities = 105/139 (76%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 110392 GGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTC 110451 ||||| || ||| | || || ||||| || | || || ||||| | | ||| |||| Sbjct 536574 GGGGGCTCCTTA-GTTCTCTACTGAGAACCAA-TTAATTCTGTCCTTTAAAGGCTGATTC 536517 Query 110452 TTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTG 110511 || || |||||||||||||| || ||||||||||| ||||||| ||||| || ||| Sbjct 536516 TTCTCAGGGATGGAGAACCAGGTTTTTCTACCCATAATCACCAAATTCTGTTTACCTTCT 536457 Query 110512 ACTGAAGACGTAGCGGTCA 110530 |||||||| || | ||||| Sbjct 536456 ACTGAAGAGGTTGTGGTCA 536438 >seq14725 Length=29362 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/222 (69%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 110392 GGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTC 110451 ||||| | || || || || ||||| ||| || || ||||| | | ||| | ||| Sbjct 4423 GGGGGTTTCTTGAGTTCTCTACTGAGAACTTAATTAATTCTGTCCTTTAAAGGCCGGTTC 4482 Query 110452 TTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTG 110511 || || |||||||||||||||||||||||| |||| ||||||| || | || ||| Sbjct 4483 TTCTCAGGGATGGAGAACCAAGTCTTTCTATCCATAATCACCAAATTTTATTTACCTTCT 4542 Query 110512 ACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCAAAGTCTCGCAGGA 110571 |||||||| || | ||||| | | | || | || || || || || | || Sbjct 4543 ACTGAAGAGGTTGTGGTCATGTTTTGGAAATAGTTTAATTCATT------CCTGACCGGG 4596 Query 110572 TGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGG 110612 |||| |||| ||||| || || | ||| |||||| ||||| Sbjct 4597 GGCCAGAGCAGGTCTCCATTATTGCTGATTCCCATGTTCTGG 4638 >seq239629 Length=61467 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/222 (71%), Gaps = 10/222 (5%) Strand=Plus/Plus Query 110394 GGGAT-CTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCT 110452 ||||| | || || || || |||| |||| ||| || ||||| | | || | ||||| Sbjct 1745 GGGATTCCTTGAGTTCTCTAGTGAGAACTAAGTTAATTCTGTCCTTTAAGGGCCAATTCT 1804 Query 110453 TTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTT-GCCTCTG 110511 | || |||||||||||| | ||||||||||| || ||||||| |||| || ||||| Sbjct 1805 TCTCAGGGATGGAGAACAAGGTCTTTCTACCTATAATCACCAAATTCTATTTACCCTCT- 1863 Query 110512 ACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCAAAGTCTCGCAGGA 110571 |||||||| || | ||||| | |||| | || || || || | | || | ||| Sbjct 1864 ACTGAAGAAGTTGTGGTCATTCTTTGAAAATACTTGAATTCATTCC--TGACTGG--GGA 1919 Query 110572 TGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGG 110612 ||| ||||| ||||| | || | ||||| |||| ||||| Sbjct 1920 --CCAGGGCAGGTCTCCATGCTTGCTGATGCTCATGTTCTGG 1959 >seq238896 Length=8276 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/222 (71%), Gaps = 10/222 (5%) Strand=Plus/Minus Query 110394 GGGAT-CTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCT 110452 ||||| | || || || || |||| |||| ||| || ||||| | | || | ||||| Sbjct 270 GGGATTCCTTGAGTTCTCTAGTGAGAACTAAGTTAATTCTGTCCTTTAAGGGCCAATTCT 211 Query 110453 TTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTT-GCCTCTG 110511 | || |||||||||||| | ||||||||||| || ||||||| |||| || ||||| Sbjct 210 TCTCAGGGATGGAGAACAAGGTCTTTCTACCTATAATCACCAAATTCTATTTACCCTCT- 152 Query 110512 ACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCAAAGTCTCGCAGGA 110571 |||||||| || | ||||| | |||| | || || || || | | || | ||| Sbjct 151 ACTGAAGAAGTTGTGGTCATTCTTTGAAAATACTTGAATTCATTCC--TGACTGG--GGA 96 Query 110572 TGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGG 110612 ||| ||||| ||||| | || | ||||| |||| ||||| Sbjct 95 --CCAGGGCAGGTCTCCATGCTTGCTGATGCTCATGTTCTGG 56 >seq238652 Length=38978 Score = 89.7 bits (98), Expect = 4e-13 Identities = 167/240 (70%), Gaps = 9/240 (4%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||| ||||| | ||||| || || || || || | || || ||| | ||||| | Sbjct 6062 ATGTGCTCCTGT-GGGGGTTCCTTGAGTTCTCTACAAAGATTTAGGTTAACTCTGTCCTT 6120 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||| | |||||| || |||||||||||||||||||||||| |||| ||||||| || Sbjct 6121 TAAAGGCCGATTCTTCTCAGGGATGGAGAACCAAGTCTTTCTATCCATAATCACCAAATT 6180 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCA 110558 ||| || | | |||||||| | | ||||| | | || | || || || || | Sbjct 6181 CTGTTTACTTTCTACTGAAGAGGGTGTGGTCATTCTTTGGAAATACTTGAATTCATTCCT 6240 Query 110559 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCT-GGACAC 110616 | ||||| | | ||||| | | |||| || |||||||||||| ||| |||||| Sbjct 6241 GA-----GCAGG-GACTAGGGCAGGTTTTCGTTCTTACCGATGCCCATGTTCTGGGACAC 6294 >seq181268 Length=46976 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/210 (70%), Gaps = 7/210 (3%) Strand=Plus/Plus Query 110404 AGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATG 110463 || || || ||||| |||| || || ||||| | | ||| ||| || | |||||| Sbjct 40786 AGTTCTCTACTGAGAACTAAATTAATTCTGTCCTTTACAGGCTGATTATTCTTAGGGATG 40845 Query 110464 GAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTGACTGAAGACGTA 110523 |||||||| ||||||||| |||| ||||||| || || || | |||||||| || Sbjct 40846 GAGAACCAGGTCTTTCTATCCATAATCACCAAATTGTGTTTAAGTTCTACTGAAGAGGTT 40905 Query 110524 GCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCAAAGTCTCGCAGGATGCCACGGCAGA 110583 | ||||| | | || | || || ||||| | ||| || |||| ||||| Sbjct 40906 GTGGTCATTCTTTGGAAATACTTGAATTCTTTCCTGAGT------GGGGGCCAGGGCAGG 40959 Query 110584 TCTCCGTTGTTCCCGATGCCCATG-TCTGG 110612 |||||||| || | || ||||||| ||||| Sbjct 40960 TCTCCGTTCTTGCTGAGGCCCATGATCTGG 40989 >seq257204 Length=1338173 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 110392 GGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTC 110451 ||||| || || || || || | | |||| || || ||||| | | ||| | |||| Sbjct 589826 GGGGGTTCCTTGAGTTCTCTACCAACAACTAAATTAATTCTGTCCTTTAAAGGCCAATTC 589767 Query 110452 TTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCTCTG 110511 || || |||||||||||||| || ||||| ||||| ||||||| ||||| || ||| Sbjct 589766 TTCTCAGGGATGGAGAACCAGGTGTTTCTCCCCATAATCACCAAATTCTGTTTACCTTCT 589707 Query 110512 ACTGAAGACGTAGCGGT 110528 |||||||| || | ||| Sbjct 589706 ACTGAAGAGGTTGTGGT 589690 >seq43875 Length=120574 Score = 86.0 bits (94), Expect = 5e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 110449 TTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 ||||| || |||||||||||||| |||||| ||||||||||||||| ||||| || ||| Sbjct 105233 TTCTTCTCAGGGATGGAGAACCAGGTCTTTTTACCCATTATCACCAAATTCTGTTTACCT 105292 Query 110509 CTGACTGAAGACGTAGCGGTCA 110530 |||||||| || | ||||| Sbjct 105293 TCCACTGAAGAGGTTGTGGTCA 105314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404977920787728