Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq257400 255 6e-63 seq253961 228 8e-55 seq250257 214 2e-50 seq262852 192 6e-44 seq249681 187 3e-42 seq260499 161 1e-34 seq48835 158 1e-33 seq254358 134 1e-26 seq253456 122 9e-23 seq238623 118 1e-21 seq262210 111 2e-19 seq166132 107 2e-18 seq261563 104 2e-17 >seq257400 Length=867372 Score = 255 bits (282), Expect = 6e-63 Identities = 407/584 (70%), Gaps = 0/584 (0%) Strand=Plus/Plus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| ||||| |||| || ||||| || ||||| | |||||| |||||||| | Sbjct 654129 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGG 654188 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 || ||||| ||||||||||| |||| ||| || || | ||||| || || |||||||| Sbjct 654189 CCAGGCATCAATCCTCGTTTCTTAAGCCAGAAGATGGATGCAAAAGAGCCAGAAAAGAAG 654248 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 || || || || || ||||| || || | |||| ||| | || || | | || | Sbjct 654249 ATTCCTTCTACTGCTGCAAAAGCTACGACACGTTCTCCATAGGTAGCTTCTTTGTCCCCA 654308 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 ||||| | ||| | |||||| ||||| || || ||||||||||| || Sbjct 654309 ATCCAACGCAAGGCCCAGTCTGCCTTCTTCTTTACGCAAGGCATCGTTTCAATTGCATTG 654368 Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808 |||||||| |||||| |||| | || || || || || || | |||||||||| Sbjct 654369 AAGAGAAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCGATAAGGAGACTATACATT 654428 Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868 || ||||| || ||||| || ||||| || || ||||| ||||| | ||||| | | Sbjct 654429 TCGGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATC 654488 Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928 ||||| || | ||||| | | || ||||| || || || |||||||| || ||| Sbjct 654489 TGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCA 654548 Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCA 23988 |||||||| ||||||| | |||||||| ||| || |||| | || ||| | Sbjct 654549 AAGAAAGCTAGAACATGTGATATAAAATATCTCTCCTCAGGCTTCAGGGCTTCCCAGTGC 654608 Query 23989 TTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTA 24048 | ||| || || || | ||| || || ||| |||||||||| ||| || |||| Sbjct 654609 TGAATGTCCTTGGAAAGATCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTA 654668 Query 24049 TACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAA 24092 ||||| |||||||||||| | || || ||||| || || || Sbjct 654669 TACATCTGCCAAATATCATGGTATTCGATAGGAAAGATGACAAA 654712 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| || ||||| | |||||| |||||||| | || ||||| ||||||||||| ||| Sbjct 657133 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAATCCTCGTTTCTTA 657192 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||| || || | ||||| || || |||||||| || || || || || ||||| || Sbjct 657193 AGCCAGAAGATGGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAAGCT 657252 Query 23653 ACAAGACGT 23661 || | |||| Sbjct 657253 ACGACACGT 657261 >seq253961 Length=405542 Score = 228 bits (252), Expect = 8e-55 Identities = 410/597 (69%), Gaps = 3/597 (1%) Strand=Plus/Plus Query 23497 TTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556 ||||||| | || ||||| ||||| |||| || ||||| || ||||| | |||||| Sbjct 310385 TTAAACATGAGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTG 310444 Query 23557 GAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT 23616 |||||||| | || ||||| ||||||| ||| || | ||| || || | ||||| || Sbjct 310445 GAAAATGTGAGGCCAGGCATCAATCCTCATTTCTTGAGCCAGAAGATGGATGCAAAAGAA 310504 Query 23617 CCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCA 23676 || |||||||| || || || || || |||||||| |||| | || ||| | || | Sbjct 310505 CCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGGCTACAACATGTTCTCCATAGGTAACT 310564 Query 23677 TTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTT 23736 | | | |||||| | | ||| | |||||| ||||| || |||||| Sbjct 310565 TCTTTGTTCCCAATCCAATGCAAGGCCCAGTCTGCCTTCTTCTTTACGCAAGGCATTGTT 310624 Query 23737 TCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGT 23796 |||||||| || |||||||| |||||| ||| | || || || | || || Sbjct 310625 TCAATTGCATTGAAGAGAAATTCCCTTTCTTTGGAATCGTTAATGTAAGTGTTGATAAGG 310684 Query 23797 AAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTA 23856 | |||||||||||||||||| || ||||| || ||||| || || ||||| || || | Sbjct 310685 AGACTATACATTTCAGAATGCATGTTTTCCATGGCAATTTGGAAGCCATAGAAGCAGCAG 310744 Query 23857 GCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCA 23916 ||||| | | ||||| || | |||| | | || |||| || || || ||| Sbjct 310745 GCTTCCGTAATCTGAACTTCTTGGCTAAATAGCTCCACCAAGTTTTGATTTACTATGCCA 310804 Query 23917 TCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAAT 23976 ||||| || ||||||| ||| ||||||| | |||||||| ||| || |||| | | Sbjct 310805 TCACTTGCTGCAAAGACAGCTAGAACATGTGATATAAAATCTCTCTCCTCAG--GCTTCG 310862 Query 23977 TTTTTC-CAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGC 24035 ||| || | | ||| || || || | ||| || || ||| |||||||||| | Sbjct 310863 GGCTTCACAGTGCTGAATGTCCTTGGAAAGATCCACCTCCTCAGCTGTCCAAAAGGAAGA 310922 Query 24036 CAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAA 24092 | || ||||||||| |||||||||||| | || ||| ||||| || || || Sbjct 310923 CTCAGCTTTCTTATACATCTGCCAAATATCATGGTATTTTATAGGAAAGATGACAAA 310979 >seq250257 Length=281617 Score = 214 bits (236), Expect = 2e-50 Identities = 392/573 (68%), Gaps = 1/573 (0%) Strand=Plus/Plus Query 23521 CAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAAT 23580 || |||| |||||||| || ||||| | |||||| |||||||| | || ||||| | | Sbjct 103453 CAGTGTAAACCTTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGT 103512 Query 23581 CCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACA 23640 |||| ||| || | ||| || || | ||||| || | |||||||| || || || || Sbjct 103513 CCTCATTTCTTGAGCCAGAAGATGGATGCAAAAGAGTCAGAAAAGAAGATTCCTTCTACT 103572 Query 23641 GCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAttttttt 23700 || |||||||| | | || | ||| | || || | | || |||||| Sbjct 103573 GCTGCAAAGGCTATGACACATTCTCCATAGGTAGCTTCTTTGTCCCCAATCCAACGCAAG 103632 Query 23701 GTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTT 23760 | ||| | |||||| ||||| || || |||||||||| || || ||||| Sbjct 103633 GCCCAGTCTGCCTTCTTCTTTACGCAAAACATCATTTCAATTGCATTGAAAAGAAATTCC 103692 Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820 |||||| |||| | || || || ||||| || | |||||||||||||||||| || Sbjct 103693 CTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATG 103752 Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880 ||||| || ||||| || || ||||| ||||| | ||||| | | ||||| || | | Sbjct 103753 TTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGA 103812 Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGA 23940 ||||| | | || ||||| || || || |||||| || ||||||||||| ||| Sbjct 103813 CTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCATCTGCTGCAAAGAAAGCTAGA 103872 Query 23941 ACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTT 24000 |||| | |||||||| ||| || |||| | || ||| | | ||| || || Sbjct 103873 ACATGTGATATAAAATATCTCTCCTCAGGCTTCAGGGCTTCCCAGTGCTGAATGTCCTTG 103932 Query 24001 GATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGC-ACGCTTATACATTAGCCA 24059 || | ||| || || |||||| ||||||| ||| || |||||||||| |||| Sbjct 103933 GAAAGATCCACCTCCTCAACTATCCAAAAGGAAGCCTCCGCTTTTCTTATACATTTGCCA 103992 Query 24060 AATATCATTATGTTGTATTGGAAATATTACGAA 24092 ||||||| | || || ||||| || || || Sbjct 103993 GATATCATGGTATTCAATAGGAAAGATGACAAA 104025 >seq262852 Length=263465 Score = 192 bits (212), Expect = 6e-44 Identities = 355/521 (68%), Gaps = 0/521 (0%) Strand=Plus/Plus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| || || |||| || ||||| || ||||| | |||||| | |||||| | Sbjct 13030 CAGGCAAAGTCGCAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGCAAATGTGAGG 13089 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 || || || | |||| |||| || | ||| || || | |||| || || |||||||| Sbjct 13090 CCAGGTATCAGTCCTTGTTTCTTGAGCCAGAAGATGGATCCAAAAGAGCCAGAAAAGAAG 13149 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 || || || || || |||||||| || | || | ||| | || || | | | | Sbjct 13150 ATTCCTTCTACTGCTGCAAAGGCTACTACACATTCTCCATAGGTAGCTTCTTTGTTCCCA 13209 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 ||||| | | ||||| |||||| |||||||| || ||||||||||| || Sbjct 13210 ATCCAATGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGTATCGTTTCAATTGCATTG 13269 Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808 |||||||| |||||| |||| | || || || || || |||| |||||||||| Sbjct 13270 AAGAGAAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCGATAAGTAGACTATACATT 13329 Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868 || ||||| || ||||| || | ||| || || ||||| || || | ||||| | | Sbjct 13330 TCCGAATGTATGTTTTCCATGGGAATTTGGAAGCCATAGAAGCAGCAGGCTTCCGTAATC 13389 Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928 ||||| | | ||||| | | || ||||| || || | |||||||| || ||| Sbjct 13390 TGAACTTTTTGGCTAAATCACTGCACCAAGTTTTCATTTACTTTGCCATCACTTGCTGCA 13449 Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCA 23988 ||||||| ||||||| | |||||||| ||| || ||| | || ||| | Sbjct 13450 CAGAAAGCTAGAACATGTGGTATAAAATATCTCTCCTCACGCTTCAGGGCTTCCCAGTGC 13509 Query 23989 TTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 | ||| || || || | ||| || || ||| |||||||||| Sbjct 13510 TGAATGTCCTTGGAAAGATCCACCTCCTCAGCTGTCCAAAA 13550 >seq249681 Length=338998 Score = 187 bits (206), Expect = 3e-42 Identities = 397/591 (67%), Gaps = 4/591 (1%) Strand=Plus/Minus Query 23497 TTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556 || |||| || || ||||| ||||| |||| || ||||| || |||| | |||||| Sbjct 145746 TTGAACATTAGGCAAGCAAAGTCACAGTGTAATCCCTCATCTCTGCTAACAAGTTCATTG 145687 Query 23557 GAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT 23616 |||||||| || || || | |||||| |||| | | || || | || ||||| || Sbjct 145686 GAAAATGTGAAGCCAGGAAACAATCCTTGTTTCTCGAGTCAGAAGACTGACGCAAAAGAG 145627 Query 23617 CCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCA 23676 || | |||||| || || || || || |||||||| ||| | | ||| | || | Sbjct 145626 CCAGTAAAGAAGATTCCTTCTACTGCTGCAAAGGCTACATATGTTCTTCCACAGGTAACT 145567 Query 23677 TTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTT 23736 | | || |||||| | | ||| | |||||| ||||||| ||| || Sbjct 145566 TCTTGGTCCCCAATCCAATGCAAGGCCCAGTCTGCCTTC---TTTACACCAAGCATTATT 145510 Query 23737 TCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGT 23796 ||| |||| || |||||||| |||||| |||| | || || | ||||| || Sbjct 145509 TCAGTTGCATTGAAGAGAAATTCCCTTTCTTTGGAATCTTTAATGTAAATGTCAATAAGG 145450 Query 23797 AAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAA-AAACATCT 23855 | |||||||| ||||||||| || ||||| || ||||| || || ||| | ||||| Sbjct 145449 AGACTATACAATTCAGAATGTATGTTTTCTATGGCAATTTGGAAGCCAACAGAAACAGTG 145390 Query 23856 AGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACC 23915 ||||| | | ||||| || | |||| | |||| ||| || | || || Sbjct 145389 GGCTTCTGTGATCTGAACTTCTTGGCTAAATTGCTCCATCAAATATTCATTCATTATGCC 145330 Query 23916 ATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAA 23975 |||||| || ||||||||||| ||||||| | ||||||| ||| || |||| | Sbjct 145329 ATCACTTGCTGCAAAGAAAGCCAGAACATGTGACATAAAATATCTCTCCTCAGGCCTCAG 145270 Query 23976 TTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGC 24035 |||||| | | ||||||| || | ||| || | ||| |||||||||| || Sbjct 145269 AGCTTTCCAGTGCTGTTTATCTTTAGAAAGATCCACCTTCTCAGCTGTCCAAAAGGAAGC 145210 Query 24036 CAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATAT 24086 | ||| ||||||||| ||||||||||| | || ||| ||||| || Sbjct 145209 CTCGGCTTTCTTATACATCTGCCAAATATCAAAGTTTTCTATAGGAAAGAT 145159 >seq260499 Length=1869696 Score = 161 bits (178), Expect = 1e-34 Identities = 390/586 (67%), Gaps = 7/586 (1%) Strand=Plus/Minus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| | || |||| || ||||| || ||||| |||||| |||||||| | Sbjct 725763 CAGGCAAAGTTGCAGTGTAAACCCTCATCTCTGCTAATAGGTTCATTGGAAAATGTGAGG 725704 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 || ||||| ||||||| ||| || | || || || | ||||| || || |||||||| Sbjct 725703 CCAGGCATCAATCCTCTTTTCTTGAGACAGAAGATCGATGCAAAAGAGCCAGAAAAGAAG 725644 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 || || || || || |||||||| |||| |||| ||| | || || | || | Sbjct 725643 ATTCCTTCTACTGCTGCAAAGGCTACAACACGTTCTCCATAGGTAGCTGCTTTGTCCCCA 725584 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 | || | ||| | |||||| |||||||| |||||||||||||| | Sbjct 725583 ACCCCATGCAAACCCCAGTCTGCCTTC---TTTACACAAAGCATTGTTTCAATTGCACTG 725527 Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808 || ||||| |||||| |||| | || || || ||||| || | |||||||||| Sbjct 725526 AAAAGAAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATT 725467 Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACA-TCT-AGCTTCAGACA 23866 ||||||| || ||||| || ||||| || || ||||| || || | | ||||| | | Sbjct 725466 TCAGAATATATGTTTTCCATGGCAATTTGGAAGCCATAGAAGCAGTGTGGGCTTCTAAAA 725407 Query 23867 ATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAG 23926 ||||| || | ||||| | | | ||||| || || || ||||||| || | Sbjct 725406 TCTGAACTTCTTGGCTAAATCGCTCCACCAGGTTTTCATTTACTATGACATCACTTGCTG 725347 Query 23927 CAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAAT 23986 | ||||||| | |||| | || ||||| ||| || || | || ||| | Sbjct 725346 AACAGAAAGCCAAAACAAGTGATACAAAATATCTCTCCGTAGGCTTCAGGGCTTCCCACT 725287 Query 23987 CATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCT 24046 | ||| || || || | ||| || || ||| |||||||||| ||| || || Sbjct 725286 GCTCAATGTCCTTGGAAAGATCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCT 725227 Query 24047 TATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAA 24092 ||||||| ||||| ||||| | || || ||||| || || || Sbjct 725226 TATACATCTGCCAA--ATCATGGTATTCGATAGGAAAGATGACAAA 725183 >seq48835 Length=336802 Score = 158 bits (174), Expect = 1e-33 Identities = 415/627 (66%), Gaps = 10/627 (2%) Strand=Plus/Plus Query 23469 TTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATCACAATGTAG 23528 |||||| |||| || | ||| || | ||||| | || |||| ||||| || || Sbjct 232301 TTCTTCCAAAGGTTTATTTACTAAGTATTGAAACATCAGGCAAACAAAGTCACAGTGAAG 232360 Query 23529 GCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTC-GTT 23587 |||||||| || || || | |||| | ||||| || | ||| ||||| | |||| ||| Sbjct 232361 CCCTTCATCTCTGCTGATGAGTTCACTGGAAAAAGTGAGTCCAGGCATAAGACCTCTGTT 232420 Query 23588 TTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAA 23647 ||||| ||| ||||| |||||||| ||||| || || |||||||| || | ||| |||| Sbjct 232421 CTTTAA-CCAGAATATAGCAGCAAAAGATCCTGAGAAAAAAATACCTTCTAGAGCAGCAA 232479 Query 23648 AGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATC-CAtttttttGTCCAA 23706 ||||||| | | | ||||| || | || ||| | ||| || | |||| Sbjct 232480 AGGCCACCACCCTTTCCCCAAAAGTAGATTTTCTATCTGCTATCACA-----AGGCCCAA 232534 Query 23707 TTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAA-GAGAAAAGTTTTTTC 23765 | || || || || | |||||||| ||||| || || |||| ||||| Sbjct 232535 TCTGCTTTTTTCTTAACGTATGGCATTGTTTCTATTGCATTAAATAAGAATTCCCTTTTC 232594 Query 23766 TTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTC 23825 || |||| | || || || || ||||| ||||||||||| || || |||| ||| | Sbjct 232595 TT-GGGATCTCTGATGTAAGTGTCTATTAGCAAACTATACATCTCTGAGTGAACATTCTG 232653 Query 23826 AATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAA 23885 || ||| ||||| ||||| ||||| | ||| || || | || | || | || Sbjct 232654 GATGAGAATTTGAAAACCATAGAAACAGCGAGCCTCTGAGACCTGTAGCTCCTGGCTGAA 232713 Query 23886 TCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATA 23945 | | | || ||||| || ||| | |||||||| || ||||| || || | || | Sbjct 232714 GCGCTCCACCAAGTTTTCATTTACAGTTCCATCACTGGCTGCAAAAAAGGCTAAGACGTG 232773 Query 23946 TTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAA 24005 ||||||| | || || | | | || ||||| | | | ||| |||||||| Sbjct 232774 AGAGATAAAATACTTCTCTTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATAA 232833 Query 24006 ATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATC 24065 ||| | || || ||||||| || |||| || | ||||||||| ||||||| | Sbjct 232834 GTCAGCCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATAGC 232893 Query 24066 ATTATGTTGTATTGGAAATATTACGAA 24092 | ||| ||||||| || || || Sbjct 232894 GGGGTACTGTGTTGGAAAAATGACAAA 232920 >seq254358 Length=18439 Score = 134 bits (148), Expect = 1e-26 Identities = 312/476 (66%), Gaps = 31/476 (7%) Strand=Plus/Plus Query 23497 TTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTA 23556 || |||| || || ||||| | || |||| || ||||| || ||||| | |||| | Sbjct 12514 TTGAACATTAGGCAAGCAAAGTTGCATTGTAAACCCTCATCTCTGCTAATAAGTTCAATG 12573 Query 23557 GAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGAT 23616 |||||||||| || ||||| ||||||| ||| || | ||| || || | Sbjct 12574 GAAAATGTTAGGCCAGGCATCAATCCTCATTTCTTGAGCCAGAAGATCG----------- 12622 Query 23617 CCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCA 23676 || || | || |||||||| |||| ||| |||| | || || Sbjct 12623 ------------ATTTGTTCTATTGCTGCAAAGGCTACAACACGGTCACCATAGGTAGCT 12670 Query 23677 TTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTT 23736 | | || ||||| | ||| | ||||| |||||| | |||||| Sbjct 12671 TATTTGTCCCCAATCCGACACAAGGCCCATTCTGCCTTATTCTTTACAGAAGGCATTGTT 12730 Query 23737 TCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATT----ATCTGTTATATATGTATCAAT 23792 |||||||| || |||||||| || | || || || | | || || |||||||| Sbjct 12731 TCAATTGCATTGAAGAGAAA----TTGCCATCCTTTGGAATTTTTAATGTAAGTATCAAT 12786 Query 23793 TAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACA 23852 || | | |||||||||||||||| || ||||| || ||||| || || ||||| | ||| Sbjct 12787 AAGGAGATTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAGACA 12846 Query 23853 TCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAAT 23912 | ||||| | | ||||| || | ||||| | | || ||||| || || || Sbjct 12847 GCAGGCTTCTGTAATCTGAACTTCTTGGCTAAATCATGCCACCAAGTTTTCATTCACTAT 12906 Query 23913 ACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAG 23968 |||||||| || |||||||||| ||||||||| |||||||| | | || |||| Sbjct 12907 GCCATCACTTGCTACAAAGAAAGCCAGAACATATGATATAAAATATTTCTCCTCAG 12962 >seq253456 Length=16905 Score = 122 bits (134), Expect = 9e-23 Identities = 286/431 (66%), Gaps = 3/431 (1%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| || ||||| | | || | |||||||| | || ||||| | ||||||||| | | Sbjct 6685 TCATCTCTGCTAATAAGTCCACTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTGA 6626 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | ||| || || | ||||| || || |||||||| | || || || | |||||||| Sbjct 6625 AGCCAGAAGATAGATGCAAAGGAGCCAGAAAAGAAGGTTCCTTCTACTGATGCAAAGGCT 6566 Query 23653 ACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCC 23712 || | || | || | ||| | | | || || ||| | ||| ||| Sbjct 6565 ACGACACCTTCTCCGGAGGTTACGTCTTTGTCCCCAAACCAACGCAAGGCCCACCCTGCC 6506 Query 23713 TTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTA 23772 || ||||||||| || ||||||||||| || ||| |||| |||||| Sbjct 6505 TT---TTTTACACAAGGCATCGTTTCAATTGCATTGAAGGGAAATTCCCTTTCTTTGGAC 6449 Query 23773 TCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCA 23832 ||| || | || ||||| | | ||||||||||||||||| || ||||| || ||| Sbjct 6448 TCTTCAGTAAAAGTGTCAATAACGAGACTATACATTTCAGAATATATGTTTTCCATGGCA 6389 Query 23833 ATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTA 23892 || || || ||| | ||| | | |||| | | ||||| || | ||||| | Sbjct 6388 ATTTGGAAGCCACACAAATAGCGGGCTTTTGTAATCTGAACTTCTTGGCTAAATCACTCC 6329 Query 23893 GCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATA 23952 | |||||||| | | | |||||||| | ||||||||||| ||||||| | || | Sbjct 6328 ACCAAATTTTCACTTATTAAGCCATCACTTCCTGCAAAGAAAGCCAGAACATGTGATACA 6269 Query 23953 AAATGTCTTTC 23963 |||| ||| || Sbjct 6268 AAATCTCTCTC 6258 >seq238623 Length=17887 Score = 118 bits (130), Expect = 1e-21 Identities = 187/262 (71%), Gaps = 12/262 (5%) Strand=Plus/Minus Query 23710 GCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTT---TTTTCT 23766 |||||| |||||||| ||| |||||| ||||||| |||||||| |||| | Sbjct 14181 GCCTTC---TTTACACAAGGAATCGTTTCAGTTGCTTTGAAGAGAAATCCCCCCTTTTTT 14125 Query 23767 TCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCA 23826 | |||| | || || | ||||| || | |||||||||||| ||||| || ||||| Sbjct 14124 GGA--ATCTTTAATGTAAATGTCAATAAGGAGACTATACATTTC-GAATGTATGTTTTCC 14068 Query 23827 ATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAAT 23886 |||||||| || || ||||| ||||| | ||||| | | ||||| | |||| | Sbjct 14067 ATAGCAATTTGGAAGCCATACAAACAGCCGGCTTCTGTAATATGAACTTGGCTAAATCA- 14009 Query 23887 CTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATAT 23946 || | || ||||| || || || |||||||| || ||||||||||| | |||| | Sbjct 14008 CTCCATG--AAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAGCCGGGACATGT 13951 Query 23947 TTTATAAAATGTCTTTCATCAG 23968 |||||||| ||| || |||| Sbjct 13950 GATATAAAATCTCTCTCCTCAG 13929 >seq262210 Length=2098626 Score = 111 bits (122), Expect = 2e-19 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 ||||||| || || || | |||||| ||||| || | ||| ||||| | |||| || | Sbjct 1751614 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTCTTCT 1751673 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | ||| ||||| |||||||| ||||| || || ||||||||||| ||||| ||||||| Sbjct 1751674 TTAACCAGAATATAGCAGCAAAAGATCCCGAGAAAAAAATACCCTCTACAGCAGCAAAGG 1751733 Query 23651 CCACAA 23656 |||||| Sbjct 1751734 CCACAA 1751739 >seq166132 Length=57562 Score = 107 bits (118), Expect = 2e-18 Identities = 240/358 (67%), Gaps = 3/358 (1%) Strand=Plus/Minus Query 23735 TTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTA 23794 |||||| | || |||||||| |||||| |||| | || || | ||| || | Sbjct 30906 TTTCAACTATATTAAAGAGAAATTCCCTTTCTTTGGAATCTTTAATGTAAGCATCGATAA 30847 Query 23795 GTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATC 23854 | | |||||||||||||||||| || ||||| || |||| || || ||||| ||||| | Sbjct 30846 GAAGACTATACATTTCAGAATGTATGTTTTCCATGACAATTTGGAAGCCATAGAAACAAC 30787 Query 23855 TAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATAC 23914 ||||| | | ||||| | | |||| | || || ||||| || || | | Sbjct 30786 GGGCTTCTGTAATCTGAACTGCTTGTCTAAATTGCTCCGCCAAGTTTTCATTTACTGTGC 30727 Query 23915 CATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATA 23974 ||||||| || | ||||||||| | ||||| | |||||| | ||| || |||| | Sbjct 30726 CATCACTTGCTGTAAAGAAAGCCAAAACATGTGATATAAAGTATCTCTCTTCAGGCTTCA 30667 Query 23975 ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTG 24034 || ||| | || || ||| |||| | || | ||| |||||||||| | Sbjct 30666 GGGCTTCCCAGAGCTGTATGTCCTTT--TAAA-GACCTACCTCAGCTGTCCAAAAGGAAG 30610 Query 24035 CCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAA 24092 || || || |||||| |||||||||||| | || ||| ||||| || || || Sbjct 30609 CCTCAGCTTTCTCATACATCTGCCAAATATCATGGTATTCTATAGGAAAGATGACAAA 30552 >seq261563 Length=484664 Score = 104 bits (114), Expect = 2e-17 Identities = 364/564 (65%), Gaps = 16/564 (3%) Strand=Plus/Plus Query 23530 CCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTT 23589 |||||||| || | || | |||||| ||||| || | ||| ||||| | |||| || Sbjct 278180 CCTTCATCTCTGTTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTCTTC 278239 Query 23590 TTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAG 23649 || | ||| ||||| ||||||| ||||| | || ||||||| | ||||| |||||| Sbjct 278240 TTTAACCAGAATATAGCAGCAAGAGATCCCAAGAAAAAAATACTTCCTACAGCAGCAAAG 278299 Query 23650 GCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTA 23709 ||||| |||| | ||| || | || ||| | |||||| | |||| Sbjct 278300 GCCACCAGACTTTCTGTAAAAGTAGATTTTCTATCTGCTATCCATCACAAGGCCCAAACC 278359 Query 23710 GCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCA 23769 | || || ||| | |||||||| ||||| || || | ||| ||| | Sbjct 278360 ACATTTTTCTTAACATATGGCATTGTTTCTATTGCATTAAATAAAAA------TTC--CC 278411 Query 23770 TTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATA 23829 || ||| | || || ||||| ||||| ||||| | || |||| ||| ||||| Sbjct 278412 TTTTCT----TGGGAGTGTCTATTAGCAAACTGTACATCCCTGAGTGAACATTCTCAATG 278467 Query 23830 GCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTG-AACATCATTAAAAAATCT 23888 ||| ||||| | || ||||| | || || | || || | | || ||||| Sbjct 278468 AGAATTTGAAAAC--TATAAACAGCGAGACTCTGGAAACTGTACCTTCTGGCTAAAATGC 278525 Query 23889 TTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTT 23948 | | | |||||||| || | ||| |||||||| | ||||| || || | || | Sbjct 278526 TCCA-CCAAATTTTCATTTAAAATTCCATCACTGGTTGCAAAAAAGGCTAAAATGTGAGA 278584 Query 23949 TATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATC 24008 ||||||| | || || | | | || ||||| | | | ||| |||||||| | Sbjct 278585 GATAAAATACTTCTCTTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATAAGTT 278644 Query 24009 AACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATT 24068 ||| || || ||||||| || || | || | ||||||||| |||||||||| Sbjct 278645 AACCTCTTCTGCTGTCCAGAAGGATGTCTGTGCCTGTTTATACATTTTCCAAATATCAAG 278704 Query 24069 ATGTTGTATTGGAAATATTACGAA 24092 | || |||||||| || || || Sbjct 278705 GTACTGGATTGGAAAGATGACAAA 278728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519733949037600