Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dasypus_20novemcinctus_20[refseq_20GCF_5F000208655.1_202012-01-06] 46,559 sequences; 3,631,522,711 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq41483 327 1e-84 seq26414 123 2e-23 seq23387 102 8e-17 seq32891 98.7 9e-16 seq22718 87.8 2e-12 seq38547 86.0 6e-12 >seq41483 Length=107006 Score = 327 bits (362), Expect = 1e-84 Identities = 612/892 (69%), Gaps = 18/892 (2%) Strand=Plus/Minus Query 15927 TTGACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTC 15986 ||||||| ||| ||| | ||||| || | |||||||| |||||||| || || || | Sbjct 77785 TTGACATCACTCCCATCCTCTGATACTCGCCCACTCTCTTCTCAAAGAAGTTGGTCTTCC 77726 Query 15987 CTTCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGC 16046 |||| | ||| ||||| ||||| || ||||| ||||| | | | | || | Sbjct 77725 CTTCCAGTGAGATATTCTCCATGAAGTCAAATGGATTCTCTACTCTGAAAACCTTGCCAA 77666 Query 16047 ATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCAC 16106 | |||| ||||| || | |||||| ||||| ||||| || ||||| ||||||||| | Sbjct 77665 AACCCAGTTCCAGCATAAGTCTATCTGCCACGAATTCAATGTACTGCTTCATTAAAGTGC 77606 Query 16107 AGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAA 16166 | |||||||| || | || ||||| | || || || | || | | |||||| |||| Sbjct 77605 AATTCATTCCAATCAGTTGCACAGGCAGGGCCTCAGTCAGGAACTCCTGTTCTATCTTAA 77546 Query 16167 CCGCTTCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTTTAATAAG----TGT 16222 | || | || ||||| ||| ||||| | || | | || ||||| ||| ||| Sbjct 77545 CAGCGTTGATAATTATTTCTTTTACT-CTCTGCT---CTGAAGGTTTGTGAAGCAGGTGT 77490 Query 16223 TTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTT 16282 || ||||||| || ||||| | || || ||||| || || || || || | || || Sbjct 77489 TTGAACATTAGGCAGGCAAAGTTGCAGTGTAATCCCTCATCTCTGCTAATAAGTTCATTG 77430 Query 16283 GAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAA 16342 ||||| || || || ||||| | ||||||||| || | ||| || || | ||||| || Sbjct 77429 GAAAACGTGAGGCCAGGCATCAATCCTCGTTTCTTGAGCCAGAAAATCGATGCAAAAGAG 77370 Query 16343 CCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGT---- 16398 ||||||||||| || ||||| ||||| ||||| || || | || || || || || Sbjct 77369 CCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGGCTACAACACGTTCTCCATAGGTAGCT 77310 Query 16399 TCTAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCAT 16458 ||| || | || | ||||| ||||| | ||| || | || ||||| ||| Sbjct 77309 TCT-TTGTCAC---CAATCCAACGCAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCAT 77254 Query 16459 GTTCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTAT 16518 | || |||||||| || | | | | |||||||| |||| ||| |||| || || Sbjct 77253 CGTTTCAATTGCATTGAAGAGAAATTCCCTTTCTTTGGAATCTTTAATGTAAGCGTCAAT 77194 Query 16519 TAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCA 16578 || | |||||||||||| ||||| || || ||||| || ||||| || ||||| || || Sbjct 77193 AAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACA 77134 Query 16579 TCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTAT 16638 | ||||| | || || ||||| | ||| | || | |||||||| || ||||| Sbjct 77133 GCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTAT 77074 Query 16639 TCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTA-TCTG 16697 ||||| || |||||||| || || || | ||| ||||||| | || | | || Sbjct 77073 GCCATCACTTGCTGCAAAGAAAGCCAGGACGTGCGATATAAAATACCTCTCCTCAGGCTT 77014 Query 16698 AAAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAG 16757 | | || ||||| || || || || | ||| ||||| || | |||||||| | Sbjct 77013 TAGGGCTT-CCCAGTGCTGAATGTCCTTAGAAAGATCCACCTCCTCAGCTGTCCAAAAGG 76955 Query 16758 AAGCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAA 16809 |||| |||| || |||||||| | ||| ||||| | ||| | || ||||| Sbjct 76954 AAGCCTCAGCTTTCTTATACATCTGCCAAATGTCATGGTATTCTATGGGAAA 76903 >seq26414 Length=1711459 Score = 123 bits (136), Expect = 2e-23 Identities = 463/725 (64%), Gaps = 7/725 (1%) Strand=Plus/Minus Query 15947 TGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTTCC 16006 ||||| |||| |||||||| || | ||| || || ||| |||| | ||||||||| ||| Sbjct 913740 TGATACTCACCCACTCTCTTCTCTATGAAGTTGGTCTTTTCTTCCAGTGAAATATTCTCC 913681 Query 16007 ATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAATAAT 16066 || || ||||| ||||| | | | | || | | |||| ||| || | | Sbjct 913680 ATGAAGTCAAATGGATTCTCTACTCCGAAAACCTTGCTGAAACCCAGTTCTGGCATAAGT 913621 Query 16067 CTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTA 16126 || ||||||||||| || ||||| ||| ||||| || |||||||| || | || Sbjct 913620 CT----GCCACAAATTCAATGTACTGCTTCGTTAAAGTGCAATTCATTCCAATCAGCTTC 913565 Query 16127 ACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTATATCT 16186 |||| | || || | | || | |||||| ||||| || | || ||||| ||| Sbjct 913564 ACAGACAGGGCCTCAATGAGGAACTCCTTTTCTGGCTTAACAGCATTGATAATTATTTCT 913505 Query 16187 CTTACTACACTATTTAACGGAGGGTTTAATAAGTGTTTAAACATTATACAAGCAAAATCA 16246 ||||| | | | || ||| | | |||||| ||||||| |||||| | ||| Sbjct 913504 TTTACTTTCTGCTCTGAAGGTTGGTGAAGCAGGTGTTTGAACATTAGGCAAGCAGAGTCA 913445 Query 16247 CAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGT 16306 || || | || || || || || || | || || ||||| | || | ||||| | | Sbjct 913444 CAGTGTCAACCCTCATCTCTGCTAATAAGTTCATTGGAAAAGGAGAGGTCAGGCATCAAT 913385 Query 16307 CCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACT 16366 || ||| || | ||| || || | |||| || || |||||||| | ||||| | Sbjct 913384 TCTTATTTCTTGAGCCAGAAAATCGATGCAAGGGAGCCTGAAAAGAAAGTTCCTTCTGCA 913325 Query 16367 GCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatccatttttta 16426 | ||| | || || | | || | | || | || | | |||| Sbjct 913324 GTTGCACAGGCTACAACAGGTTCTGCAGAGGTAACTTCTTCATCCCCAGTCCAACACAAG 913265 Query 16427 gcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAttt 16486 || || | ||| || || || | ||| | || |||||||| || | | | | Sbjct 913264 GCTCAGTCTGCCTT---CTTTACGCGAGGCATCGTTTCAATTGCATTGAAGAGAAACTCC 913208 Query 16487 ttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATA 16546 |||||||| |||| |||||||| || || || | |||||||||| | ||| || Sbjct 913207 CTTTCTTTGTAATCTTTAATATAAGGGTCAATAAGGAGACTATACATTGCAGAACATATG 913148 Query 16547 TTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAG 16606 || ||||| || ||| | || ||||| || || | | || | || || ||||| | Sbjct 913147 TTTTCCATGGCAATCCGGAAGCCATAGAAACAGCCGGTTTTTGTAATCTGAACTTCTTGG 913088 Query 16607 TAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGT 16666 ||| | || | |||||||| || ||| | | ||| || | |||||| || || || Sbjct 913087 CTAAATCACTCCACCAAGTTTTCATTTACTGTGCTATCACTTGATGCAAAGAAAGCCAGG 913028 Query 16667 ATGTG 16671 | ||| Sbjct 913027 ACGTG 913023 >seq23387 Length=6883506 Score = 102 bits (112), Expect = 8e-17 Identities = 182/266 (68%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 15927 TTGACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTC 15986 ||||||| ||| ||| | ||||| |||| ||| ||||||||||||| || || |||| Sbjct 695484 TTGACATCACTCTCATCCTCTGATACTCACCCACTTTCTTTTCAAAGAAGTTGGTCTTTC 695543 Query 15987 CTTCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGC 16046 |||| | ||| ||||| ||||| || ||||| |||||| | | | || | | Sbjct 695544 CTTCCAGTGAGATATTCTCCATGAAGTCAAATAGATTTTCTACCCTGAAAACCTTGTTGA 695603 Query 16047 ATCCCAATTCCAACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCAC 16106 | || | ||||| || |||||||| |||| ||| | || || | ||||||||| | Sbjct 695604 AACCTAGTTCCAGCATAAATCTATCTGCCATCAATGCAATGTATGGCTTCATTAAAGTGC 695663 Query 16107 AGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAA 16166 | ||||||| || | || |||| | || || || | || | | |||||| | || Sbjct 695664 AAGTCATTCCAATCAGCTTCACAGCTAGGGCCTCAGTCAGGAACTCCTGTTCTATCTCAA 695723 Query 16167 CCGCTTCAATGATTATATCTCTTACT 16192 | | || ||||| ||| ||||| Sbjct 695724 TAGTATTGATAATTATTTCTTTTACT 695749 >seq32891 Length=1830481 Score = 98.7 bits (108), Expect = 9e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944 |||| ||||| ||| | | || ||||||||| | | | || |||||| | | Sbjct 494722 TTTAGAAATCTGCATCCAACGTGAAGACATTATCTCTGGTTTCTGCCATAACAGCAAAAC 494663 Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004 ||||| || ||||| || ||||||||||||||||| |||||||| ||||| |||| Sbjct 494662 GCTGATACTCTGCAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTT 494603 Query 16005 CCATAAAATCAAAAGGATTTTTTG 16028 ||||||||||||| ||||||| || Sbjct 494602 CCATAAAATCAAAGGGATTTTCTG 494579 >seq22718 Length=2167422 Score = 87.8 bits (96), Expect = 2e-12 Identities = 118/163 (72%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 16219 GTGTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTC 16278 |||||| ||||||| | ||||| | || || || || || ||||| || || | || Sbjct 84248 GTGTTTGAACATTAGGTAGGCAAAGTTGCAGTGTAAACCCTCATCCCTGCTAATAAGTTC 84307 Query 16279 GTTTGAAAAT-GTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAA 16337 || |||| || || || ||||| ||| ||||||| || | ||| || | | |||| Sbjct 84308 ATTGAAAAAACGTGAGGCCAGGCATCAGTTCTCGTTTCTTCAGCCAGAAAACTGTTGCAA 84367 Query 16338 ATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAAC 16380 | |||||||||||||| || |||| ||||| ||||| || || Sbjct 84368 AAGAACCAGAAAAGAAGATTCCTTTTACTGCTGCAAAGGCTAC 84410 >seq38547 Length=20521 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 16488 tttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATAT 16547 |||||||| |||| ||| ||||| || || || | |||||||||||| ||||| |||| Sbjct 11373 TTTCTTTGGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATAT 11314 Query 16548 TCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTC 16602 | ||||| || ||||| || ||||| || || | ||||| | || || ||||| Sbjct 11313 TTTCCATGGCAATCTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 11259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462242823797400