Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dasypus_20novemcinctus_20[refseq_20GCF_5F000208655.1_202012-01-06] 46,559 sequences; 3,631,522,711 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq7364 86.0 5e-12 seq38098 82.4 6e-11 seq184 82.4 6e-11 >seq7364 Length=507146 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || ||||| || || ||||||||||||| || || | ||| Sbjct 324068 AGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCT 324009 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || || || ||| |||| || || || || || || | ||||||||| || Sbjct 324008 TCCAGCTGCTTCCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 323949 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | |||||| | ||| ||||||| |||||| ||| | ||||||| | Sbjct 323948 TGGATCTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACTTCGAGGGTGATGGTC 323889 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || ||||| || || || || || ||||| Sbjct 323888 TTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 323857 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| || ||||||||||| | || || | |||| Sbjct 324296 AGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 324237 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || || || ||| |||| || || || || || || | ||||||||| || Sbjct 324236 TCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCC 324177 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | |||||| | ||| ||||||| |||||| || | ||||||| | Sbjct 324176 TGGATCTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTC 324117 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || |||||||| || || || || || ||||| Sbjct 324116 TTCCCGGTCAAGGTCTTCACGAAGATCTGCAT 324085 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || || || || ||||||||||||| || || | ||| Sbjct 323384 AGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCT 323325 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || || | ||| ||||| || Sbjct 323324 TCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 323265 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | |||||| | ||| ||||||| |||||| || | ||||||| | Sbjct 323264 TGGATCTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCCACCTCGAGGGTGATGGTC 323205 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || |||||||| || || || || || |||||| Sbjct 323204 TTCCCGGTCAAGGTCTTCACGAAGATCTGCATT 323172 >seq38098 Length=3408049 Score = 82.4 bits (90), Expect = 6e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 ||||| || || || ||||||||||||||||| | || || | |||||||| ||| Sbjct 1930808 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCATCTTCCAGTTGC 1930749 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| ||| |||| ||||| |||||||| || | ||||||||||| Sbjct 1930748 TTGCCAGCAAAGATCAGTCTCTGTTGATCTGGAGGAATTCCTTCCTTATC 1930699 >seq184 Length=1840191 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| || |||||||| || | | || | |||| Sbjct 1422861 AGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCT 1422802 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| || |||| || || || || || || | |||||||||||| Sbjct 1422801 TCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCAGGCGGGATGCCTTCCTTATCC 1422742 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | ||| || | | | ||||||| |||||| || | ||||||| | Sbjct 1422741 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTC 1422682 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 |||||||||| ||||| || || || |||||||| Sbjct 1422681 TTGCCGGTCAGGGTTTTCACGAAGATCTGCATTTT 1422647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379128745870455