Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dasypus_20novemcinctus_20[refseq_20GCF_5F000208655.1_202012-01-06] 46,559 sequences; 3,631,522,711 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq14343 93.3 4e-14 seq28015 91.5 1e-13 seq32136 87.8 2e-12 >seq14343 Length=3808997 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/215 (71%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| || || || ||||| |||||||| || || || || | | Sbjct 1732348 CAACACAAGATGAAGAGTGGACTCATTTTGAATGTTGTAGTCAGACAAAGTATGTCCA-T 1732290 Query 143031 CTTCGAGTTG-TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 |||| ||||| ||| |||||| ||||||| | |||||||| ||||| || ||||| || Sbjct 1732289 CTTCTAGTTGCTTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTA 1732230 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || || || ||| | | ||| || |||| ||||| || |||| ||| | Sbjct 1732229 TCCTGGATCTTGGCTTTCATATTTTCTCTTGTATCCGAAGGTTCAACCTCAAGAGTGATG 1732170 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| || |||| ||||||||||| || ||||| Sbjct 1732169 GTCTTTCCCGTCAGGGTTTTTACGAAAATCTGCAT 1732135 >seq28015 Length=3406059 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| || || || ||||| |||||||| || || || | || | | Sbjct 355535 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA-T 355477 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||| ||||| || |||||| ||||||| | || ||||| ||||| || ||||| || | Sbjct 355476 CTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGATGATCAGGAGGAATTCCTTCCTTAT 355417 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 | || || ||| | | ||| | || |||| ||||| || |||| ||| | | Sbjct 355416 CCTGGATCTTGGCTTTCACATTTTCTATTGTATCCGAAGGTTCAACCTCAAGAGTGATGG 355357 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| | ||| ||||||||||| || ||||| Sbjct 355356 TCTTTCACATCAGGGTTTTTACGAAAATCTGCAT 355323 >seq32136 Length=3008250 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 143030 ||| || | ||||| ||||| || ||| | |||||||| || || || || | | Sbjct 2106513 CAACACAAGATGAAAAGTAGACTCCTTT-GAATGTTGTAGTCAGACAAAGTATGTCCA-T 2106570 Query 143031 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 143090 |||| ||||| || |||||| ||||||| | |||||||| ||||| || ||||| || | Sbjct 2106571 CTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTAT 2106630 Query 143091 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCG 143150 | || || ||| | | ||| | | |||| ||||| || |||| ||| | | Sbjct 2106631 CCTGGATCTTGGCTTTCACATTTTCTATTGGATCCGAAGGTTCAACCTCAAGAGTGATGG 2106690 Query 143151 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 |||| || |||| ||||||||||| || ||||| Sbjct 2106691 TCTTTCCCGTCAG-GTTTTTACGAAAATCTGCAT 2106723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506719323956880