Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dasypus_20novemcinctus_20[refseq_20GCF_5F000208655.1_202012-01-06] 46,559 sequences; 3,631,522,711 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq41483 223 5e-53 >seq41483 Length=107006 Score = 223 bits (246), Expect = 5e-53 Identities = 582/877 (66%), Gaps = 22/877 (3%) Strand=Plus/Plus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 |||||||| || |||||||||||| | ||||| || || ||| |||| ||||||||| Sbjct 76903 TTTCCCATAGAATACCATGACATTTGGCAGATGTATAAGAAAGCTGAGGCTTCCTTTTGG 76962 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || | || ||||| ||||| || |||||| | | | ||||| | | | |||| Sbjct 76963 ACAGCTGAGGAGGTGGATCTTTCTAAGGACATTCAGCACTGGGAAGCCCTAAAGCCTGA- 77021 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 ||| | | |||||||||||| | |||| |||||||| | ||||| || || Sbjct 77022 --GGAGAGGTATTTTATATCGCACGTCCTGGCTTTCTTTGCAGCAAGTGATGGCATAGTA 77079 Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTGCTT 125236 || || || || || ||||| |||| |||| | ||| |||| | || || Sbjct 77080 AATGAAAACTTGGTGGAGCGATTTAGCCAAGAAGTTCA-GATTACAGAAGCCCGCTGTTT 77138 Query 125237 TTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 || || ||||| || || || ||| | || || |||||||| | || ||||| Sbjct 77139 CTATGGCTTCCAGATTGCCATGGAAAACATACATTCTGAAATGTATAGTCTCCTTATTGA 77198 Query 125297 CATGTACATTCGCGATCCGCAACGTAA-ACACATGCTCTTTAACGCAATCGACACGGTGC 125355 | |||||| ||| | ||| | || | | ||||| || ||||| || ||| ||| Sbjct 77199 CGCTTACATTAAAGATTC-CAAAGAAAGGGAATTTCTCTTCAATGCAATTGAAACGATGC 77257 Query 125356 CGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGT 125415 | | | || || ||||| | |||| | || ||||| | |||| | | || | | Sbjct 77258 CTTGTGTAAAGAAGAAGGCAGACTGGGCCTTGCGTTGGATTGGTGACAAAGAAGCTACCT 77317 Query 125416 ACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTG 125475 | | || | | || || || || || ||||| || ||||||||||| || ||||| Sbjct 77318 ATGGAGAACGTGTTGTAGCCTTTGCAGCAGTAGAAGGAATCTTCTTTTCTGGCTCTTTTG 77377 Query 125476 CGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGT 125535 | | || || ||||||||||| || ||| | ||||| || || ||| || || Sbjct 77378 CATCGATTTTCTGGCTCAAGAAACGAGGATTGATGCCTGGCCTCACGTTTTCCAATGAAC 77437 Query 125536 TTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATC 125595 |||| |||| ||||| ||||||| |||||||| ||| |||| ||| | | Sbjct 77438 TTATTAGCAGAGATGAGGGATTACACTGCAACTTTGCCTGCCTAATGTT---CAAACACC 77494 Query 125596 TGCGTCCCGA--GTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGT 125653 ||| || | | | |||| ||| || ||||| | || | | | | || || Sbjct 77495 TGCTTCACAAACCTTCAGA-GCAGAGAGTAAAAG-------AAATAATTATCAACGCTGT 77546 Query 125654 GAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGT-CAGCATGATTGGCATGAACT 125712 | ||||||||| ||||| || || || |||| || || || | ||||||| ||||| | Sbjct 77547 TAAGATAGAACAGGAGTTCCTGACTGAGGCCCTGCCTGTGCAAC-TGATTGGAATGAATT 77605 Query 125713 GCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTG 125772 ||| ||||| ||||||| || || ||||||||| | || || || || | Sbjct 77606 GCACTTTAATGAAGCAGTACATTGAATTCGTGGCAGATAGACTTATGCTGGAACTGGGTT 77665 Query 125773 GCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGG 125832 ||||| ||| || | ||||||| ||||| |||||| | || ||||| || | Sbjct 77666 TTGGCAAGGTTTTCAGAGTAGAGAATCCATTTGACTTCATGGAGAATATCTCACTGGAAG 77725 Query 125833 GTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTA 125869 | ||||||||||| || ||||||| || ||||||| Sbjct 77726 GGAAGACCAACTTCTTTGAGAAGAGAGTGGGCGAGTA 77762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740627912808840