Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dasypus_20novemcinctus_20[refseq_20GCF_5F000208655.1_202012-01-06] 46,559 sequences; 3,631,522,711 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq41483 318 5e-82 seq32891 114 1e-20 seq38547 93.3 4e-14 seq22718 86.0 5e-12 >seq41483 Length=107006 Score = 318 bits (352), Expect = 5e-82 Identities = 614/897 (68%), Gaps = 28/897 (3%) Strand=Plus/Minus Query 12843 TTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTC 12902 ||||||| || ||| | ||||| |||| ||||| || ||||| ||||| || || | Sbjct 77785 TTGACATCACTCCCATCCTCTGATACTCGCCCACTCTCTTCTCAAAGAAGTTGGTCTTCC 77726 Query 12903 CTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTT----TCGAACAATAGTATTTT 12958 |||| | || ||||| ||||| || || || ||||| | || | || || Sbjct 77725 CTTCCAGTGAGATATTCTCCATGAAGTCAAATGGATTCTCTACTCTGAAAACC----TTG 77670 Query 12959 TTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAA 13018 | | || | ||| || | | ||| || || || || || |||||||| ||||||||| Sbjct 77669 CCAAAACCCAGTTCCAGCATAAGTCTATCTGCCACGAATTCAATGTACTGCTTCATTAAA 77610 Query 13019 TCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATA 13078 || |||||||| || | || ||||||| || || || | || | | |||||| Sbjct 77609 GTGCAATTCATTCCAATCAGTTGCACAGGCAGGGCCTCAGTCAGGAACTCCTGTTCTATC 77550 Query 13079 TCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATT-TGAT--AGA 13135 | ||| || | ||||| ||| ||| ||| | | |||| | ||| || ||| || Sbjct 77549 TTAACAGCGTTGATAATTATTTCTTTTACTCTCTGCTCTGA---AGGTTTGTGAAGCAGG 77493 Query 13136 TGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCG 13195 || || ||||| | || ||||| | ||||| ||||| |||||||| || || || || Sbjct 77492 TGTTTGAACATTAGGCAGGCAAAGTTGCAGTGTAATCCCTCATCTCTGCTAATAAGTTCA 77433 Query 13196 TTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAAC 13255 || ||||| || || || ||||| | |||||||| || | ||| || || | ||||| Sbjct 77432 TTGGAAAACGTGAGGCCAGGCATCAATCCTCGTTTCTTGAGCCAGAAAATCGATGCAAAA 77373 Query 13256 GAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAAC-CTTTCACCATACGT 13314 || || ||||| || |||||||| ||||||||||| |||| |||| | ||| ||||| || Sbjct 77372 GAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGGCTA-CAACACGTTCTCCATAGGT 77314 Query 13315 A-CTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCA 13373 | || ||| | | | ||||| |||||||| ||| || | || || || || Sbjct 77313 AGCTTCTTTGTCAC-CAATCCAACGCAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCA 77255 Query 13374 TATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTA 13433 | |||| ||||| || || | | | | |||| || ||| ||| |||| || | Sbjct 77254 TCGTTTCAATTGCATTGAAGAGAAATTCCCTTTCTTTGGAATCTTTAATGTAAGCGTCAA 77195 Query 13434 TCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAAC 13493 | | | ||||||||||| ||||| || |||||||| || || ||||| ||||| |||| Sbjct 77194 TAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAAC 77135 Query 13494 ATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTA 13553 | | || |||| | ||||||||| | ||||| || | |||||||| || |||| Sbjct 77134 AGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTA 77075 Query 13554 TCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttC-----GTT 13608 | || ||||| || ||||| ||||| || | |||| ||||| | | || | | Sbjct 77074 TGCCATCACTTGCTGCAAAGAAAGCCAGGACGTGCGATATAAAATACCTCTCCTCAGGCT 77015 Query 13609 TTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCA 13668 || | | | ||| | ||| || || || | ||| ||||||||| | ||||| Sbjct 77014 TTAGGGC-----TTCCCAGTGCTGAATGTCCTTAGAAAGATCCACCTCCTCAGCTGTCCA 76960 Query 13669 AAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAA 13725 ||| ||||| |||| |||||||||||| ||| || || | || | |||||||| Sbjct 76959 AAAGGAAGCCTCAGCTTTCTTATACATCTGCCAAATGTCATGGTATTCTATGGGAAA 76903 >seq32891 Length=1830481 Score = 114 bits (126), Expect = 1e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 13173 CTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTT 13232 |||||||||| || || || || || ||||| || || || |||||||| |||| || | Sbjct 483779 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTAAGTCCAGGCATAAGACCTCTCTTCT 483720 Query 13233 TAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACG 13292 | | ||| |||||||||||||| || ||||| ||||| |||||||| || || ||||| | Sbjct 483719 TTAACCAGAATATAGCAGCAAAAGATCCCGAGAAAAAAATTCCTTCTACAGCAGCAAAGG 483660 Query 13293 CTATCAACCTTTCACC 13308 | | || |||||| || Sbjct 483659 CCACCACCCTTTCCCC 483644 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 12980 AATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAAT 13039 ||||||||||| |||||||| |||||||||||||| ||| |||| |||||||| || | Sbjct 490803 AATCTGTCAGCTACAAACTCAATGTACTGTTTCATCAAAACACAATTCATTCCAATGAGG 490744 Query 13040 TTTACAGGCATAGCTTCTGTTAAAAA 13065 || |||| |||||||||||||| Sbjct 490743 CCAACTGGCAAGGCTTCTGTTAAAAA 490718 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 12863 TGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCC 12922 ||||| || ||||| ||| ||||| || |||||||| |||||||| ||||| |||||| Sbjct 494660 TGATACTCTGCAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCC 494601 Query 12923 ATAAAATCGAAAGGATTTT 12941 |||||||| || ||||||| Sbjct 494600 ATAAAATCAAAGGGATTTT 494582 >seq38547 Length=20521 Score = 93.3 bits (102), Expect = 4e-14 Identities = 97/126 (77%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234 |||||||| || || || || || ||||| || || || ||||| | |||||||| || Sbjct 13264 TCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAATCCTCGTTTCTTG 13205 Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294 | ||| || || | ||||| || || ||||| || |||||||| ||||||||||| ||| Sbjct 13204 AGCCAGAAAATCGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGGCT 13145 Query 13295 ATCAAC 13300 | |||| Sbjct 13144 A-CAAC 13140 >seq22718 Length=2167422 Score = 86.0 bits (94), Expect = 5e-12 Identities = 118/164 (72%), Gaps = 1/164 (1%) Strand=Plus/Plus Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 || || || ||||| | | ||||| | ||||| || || ||||| || || || || Sbjct 84246 AGGTGTTTGAACATTAGGTAGGCAAAGTTGCAGTGTAAACCCTCATCCCTGCTAATAAGT 84305 Query 13193 TCGTTTGAAAAT-GTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGC 13251 || || |||| || || || ||||| || ||||||| || | ||| || | | || Sbjct 84306 TCATTGAAAAAACGTGAGGCCAGGCATCAGTTCTCGTTTCTTCAGCCAGAAAACTGTTGC 84365 Query 13252 AAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTA 13295 ||| ||||| ||||| || ||||||| ||||||||||| |||| Sbjct 84366 AAAAGAACCAGAAAAGAAGATTCCTTTTACTGCTGCAAAGGCTA 84409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430737844289718