Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dasypus_20novemcinctus_20[refseq_20GCF_5F000208655.1_202012-01-06] 46,559 sequences; 3,631,522,711 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq7364 113 4e-20 seq21649 104 2e-17 seq25612 89.7 4e-13 >seq7364 Length=507146 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || ||||||| ||||||||||| | | Sbjct 323857 ATGCAGATCTTCGTGAAGACCTTGACTGGGAAGACCATCACCCTCGAAGTGGAGCCCAGT 323916 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| | ||| || ||| ||||| ||||| || || |||||||| Sbjct 323917 GACACCATTGAGAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAG 323976 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || |||||||| || || | ||||| | ||||| || ||| ||||| Sbjct 323977 CAGAGGCTCATCTTTGCCGGGAAGCAGCTGGAAGACGGCCGCACCCTGTCCGACTACAAC 324036 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || |||||||| || || | || || | || ||||| || Sbjct 324037 ATCCAGAAGGAATCCACCCTCCACCTGGTCCTCCGTCTTAGAGGTGG 324083 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || ||||||| ||||||||||| | | Sbjct 323401 ATGCAGATCTTCGTGAAGACCTTGACTGGGAAGACCATCACCCTCGAAGTGGAGCCCAGT 323460 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| | ||| || ||| ||||| || || || || |||||||| Sbjct 323461 GACACCATTGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 323520 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||| || || || | ||||| | ||||| || ||| ||||| Sbjct 323521 CAGAGGCTCATCTTTGCTGGGAAGCAGCTGGAAGACGGCCGCACCCTGTCCGACTACAAC 323580 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || || ||||| || || | || || | || ||||| || Sbjct 323581 ATTCAGAAGGAGTCCACCCTCCACCTGGTCCTCCGTCTTAGAGGTGG 323627 >seq21649 Length=9256596 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || ||||||| ||||||||||| | | Sbjct 572672 ATGCAGATCTTCGTGAAGACCTTGACTGGGAAGACCATCACCCTCGAAGTGGAGCCCAGT 572731 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| | ||| || ||| ||||| || || || || |||||||| Sbjct 572732 GACACCATTGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 572791 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||| || || || | ||||| | ||||| || ||| ||||| Sbjct 572792 CAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGACGGCCGCACCCTGTCCGACTACAAC 572851 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || || ||||| || || | || || | || ||||| || Sbjct 572852 ATTCAGAAGGAGTCCACCCTCCACCTGGTCCTCCGTCTTAGAGGTGG 572898 >seq25612 Length=2894667 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 |||||||| || || || ||||| ||||||||||| ||||||| |||| |||||| | Sbjct 1825375 ACAATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTCGAGGTGGAGCCC 1825316 Query 25056 TCTGACACTATCGAG--TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 ||||| | ||| | || | || || | || ||||| ||||| || || |||| Sbjct 1825315 AGCGACACCACTGAGAATGTCT-AGGCTAAGACCCA-GGACAAGGAAGGCATCCCTCCTG 1825258 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 |||| || || | ||||||||||| || || | ||||| ||||| || || | Sbjct 1825257 ACCAGCAAAGGTTGATTTTTGCCGGGAAGCAGCTGGAAGA----CGCACCCTGTCTGACT 1825202 Query 25174 ACAATATTCAAAAAGAATCCACGCTACA 25201 | || || || ||||| ||||| || || Sbjct 1825201 AAAACATCCAGAAAGAGTCCACTCTGCA 1825174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433082113307585