Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dasypus_20novemcinctus_20[refseq_20GCF_5F000208655.1_202012-01-06] 46,559 sequences; 3,631,522,711 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq41483 329 4e-85 seq22718 125 8e-24 seq38547 95.1 1e-14 >seq41483 Length=107006 Score = 329 bits (364), Expect = 4e-85 Identities = 535/761 (70%), Gaps = 7/761 (1%) Strand=Plus/Minus Query 92919 ATAA-TCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGA 92977 |||| |||||| || || ||||| |||||||| ||| ||| ||||||||||| | Sbjct 77651 ATAAGTCTATCTGCCACGAATTCAATGTACTGCTTCATTAAAGTGCAATTCATTCCAATC 77592 Query 92978 AGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAG 93037 || | ||||| || || || |||| ||| || | || || ||| || | | | Sbjct 77591 AGTTGCACAGGCAGGGCCTCAGTCAGGAACTCCTGTTCTATCTTAACAGCGTTGATAATT 77532 Query 93038 ATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCA 93097 |||||| ||||||| | || ||||| || | | | ||| |||||| ||| ||| Sbjct 77531 ATTTCTTTTACTCTCTGCTCTGAAGGTTTGTGAAGCAGGTGTTTGAACATTAGGCAGGCA 77472 Query 93098 AAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACT-CATTGCTGAATGTTAAACCTGG 93156 |||| | ||||| || || |||| || || || | ||||| || || | || || Sbjct 77471 AAGTTGCAGTGTAATCCCTCATCTC-TGCTAATAAGTTCATTGGAAAACGTGAGGCCAGG 77413 Query 93157 TAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACC 93216 | || |||||||||||||||||| || || || |||||| |||||||| || || || Sbjct 77412 CATCAATCCTCGTTTCTTGAGCCAGAAAATCGATGCAAAAGAGCCAGAAAAGAAGATTCC 77353 Query 93217 TTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCA 93276 ||| || |||||||| || |||| |||||| || | | || || | ||||| Sbjct 77352 TTCTACTGCTGCAAAGGCTACAACACGTTCTCCATAGGTAGCTTCTTTGTCACCAATCCA 77293 Query 93277 TTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAG 93336 || ||||| || || || ||||| | |||||| | ||||| || || || || || Sbjct 77292 ACGCAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCATCGTTTCAATTGCATTGAAGAG 77233 Query 93337 GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGA 93396 | || | || | |||||| ||||| | || || | ||| |||||||||||| Sbjct 77232 AAATTCCCTTTCTTTGGAATCTTTAATGTAAGCGTCAATAAGGAGACTATACATTTCAGA 77173 Query 93397 ATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCAC 93456 ||| | || ||||| ||||| ||||| || |||||||| | ||||| || ||||| || Sbjct 77172 ATGTATGTTTTCCATGGCAATCTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAAC 77113 Query 93457 TTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaa 93516 |||||| ||||| ||| || | |||||||| ||||| ||||| ||||||||| || Sbjct 77112 TTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAA 77053 Query 93517 aGCCAATATATGCTTTATAAAATGTTTCTCATCA-TCTTTAAGCTTATCCCAAT-CGGAT 93574 ||||| | ||| |||||||| |||| ||| ||||| | | ||||| | | || Sbjct 77052 AGCCAGGACGTGCGATATAAAATACCTCTCCTCAGGCTTTAGGGCT-TCCCAGTGCTGA- 76995 Query 93575 AGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTAC 93634 | || || |||||||| || || || | |||||||| || || || ||||| || ||| Sbjct 76994 ATGTCCTTAGAAAGATCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATAC 76935 Query 93635 ATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 || | ||| ||||| || |||| || ||||| |||||||| Sbjct 76934 ATCTGCCAAATGTCATGGTATTCTATGGGAAAGATGACAAA 76894 >seq22718 Length=2167422 Score = 125 bits (138), Expect = 8e-24 Identities = 206/292 (71%), Gaps = 4/292 (1%) Strand=Plus/Plus Query 93385 ATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTC 93444 ||||||||||||||| | || ||||| || | ||||| | ||||||||| | ||| Sbjct 84540 ATACATTTCAGAATGTATGTTTTCCATGACAGTCTGGAAGCTGTAGAAACAGTGGGTTTC 84599 Query 93445 CGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGA 93504 | |||||||||||||| |||| ||| || | |||||||| ||||| |||| Sbjct 84600 TATAATCTGCACTTCTTGGCTAAATTCCTCCACCAAGTTTTCATTTACTATGCCATTACT 84659 Query 93505 TGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATC 93564 ||||||||| |||| || || ||| ||||||| | | | || ||| || || Sbjct 84660 TGCTGCAAAGAAAG-CAGGATGTGCGATATAAAACATCTACCCTCGGGTTTTAGGGCTTC 84718 Query 93565 CCAAT-CGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 ||| | | || | || || ||||||| || || || | |||||||| || || || | Sbjct 84719 CCAGTGCTGA-ATGTCCTTGGAAAGATTCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAG 84777 Query 93624 CTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 |||| || |||| | ||| ||||| || |||| | ||||| |||||||| Sbjct 84778 CTTTCTT-AACATCTGCCAAATGTCATGGTATTCTGTGGGAAAGATGACAAA 84828 >seq38547 Length=20521 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 |||||| ||||| || || || | ||| ||||||||||||||| | ||| ||||| Sbjct 11365 GAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATATTTTCCATG 11306 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472 ||||| ||||| || |||||||| | ||||| || ||||| |||||||| ||||| | Sbjct 11305 GCAATCTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGC 11246 Query 93473 TCTAC 93477 || || Sbjct 11245 TCCAC 11241 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 |||||| || || | || || | || |||||||||||||||||| || || || ||| Sbjct 13246 TCATTGGAAAACGTGAGGCCAGGCATCAATCCTCGTTTCTTGAGCCAGAAAATCGATGCA 13187 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 ||| |||||||| || || ||||| || |||||||| || |||| |||||| Sbjct 13186 AAAGAGCCAGAAAAGAAGATTCCTTCTACTGCTGCAAAGGCTACAACACGTTC 13134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556536713975160