Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dasypus_20novemcinctus_20[refseq_20GCF_5F000208655.1_202012-01-06] 46,559 sequences; 3,631,522,711 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1970 147 2e-30 seq28971 107 2e-18 seq17376 86.0 5e-12 >seq1970 Length=734494 Score = 147 bits (162), Expect = 2e-30 Identities = 131/164 (80%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || || |||| ||| || |||||||| ||||| |||| |||||||||||||| || || Sbjct 336875 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGAGCATAGCTGGCGATGTTGAAAGGC 336934 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || ||||| |||||||| ||||||| |||||||||||| ||||| ||||| || || | Sbjct 336935 ACGCCGAGGCCCATGTCTCCCGACCGCTGGTAGAGCTGGCACGAAAGCTCACCACTGCCC 336994 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032 ||||| ||||| || | | ||||||||| || || ||||| || Sbjct 336995 ACGTAGAACTGGCAAAGAGCGTGGCACGGCGGCAGTGCCATCAG 337038 Score = 116 bits (128), Expect = 3e-21 Identities = 127/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 30149 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30208 |||| || |||| ||||| || |||||||||||||| || || || || || |||| || Sbjct 340895 TCATATCTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCCAAGT 340954 Query 30209 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30268 |||| ||||| ||| ||| ||| |||||||||||| | ||| || ||||||| Sbjct 340955 CTCCTTCTTCTCTGGTGGAGAATCCCAGGCCGTCCAAAAAGTCGCGGGATCCATTGGCGT 341014 Query 30269 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 ||||||| || || || || ||||||||||| | |||||||| || Sbjct 341015 CCCAGATTTTCACTCCTTTGGAAGAGAGCTCTTTAGCATTTGTGGATCC 341063 >seq28971 Length=706216 Score = 107 bits (118), Expect = 2e-18 Identities = 183/259 (71%), Gaps = 10/259 (4%) Strand=Plus/Minus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||||||||| ||||| || | || || || ||||| |||| || || ||||| | Sbjct 87705 ATGAGCTCCTTGGGGGGGTTCCCTGAGTTCTCTACTGAGAACTATATTAATTCTGTCCTT 87646 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||||| ||| || ||||| ||| ||||||| |||||||||||||| ||||||| || Sbjct 87645 TAAAGGTCAATTTTTCTCGGGAATG-AGAACCAGGTCTTTCTACCCATAATCACCA-ATT 87588 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCA 112259 ||| || ||| |||||||| | |||| | | || | || | || || | Sbjct 87587 CTGTTTACCTTCTACTGAAGAGACTGTAGTCATTTTTTGGAAATACTTGTACTCATTCCT 87528 Query 112260 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACA 112318 | ||||| |||| |||| |||||||| || |||||||||||| ||||| ||| Sbjct 87527 GA-----GCAGG-GGCCAGGGCATGTCTCCGTTCTTGCCGATGCCCATGTTCTGG-GACA 87475 Query 112319 CGGCCACGATACCGTTCAG 112337 ||| || |||| ||| || Sbjct 87474 CGGTGACAATACAGTTTAG 87456 >seq17376 Length=3367665 Score = 86.0 bits (94), Expect = 5e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 112105 AGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATG 112164 || || || ||||| |||| || || ||||| | | ||||| ||| || || || ||| Sbjct 1036757 AGTTCTCTACTGAGAACTATATTAATTCTGTCCTTTAAAGGTCGATTTTTCTCAGGAATG 1036816 Query 112165 GAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 |||||||| |||||||||||||| ||||||| ||||| || ||| Sbjct 1036817 GAGAACCAGGTCTTTCTACCCATAATCACCAAATTCTGTTTACCT 1036861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408385734922907