Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dasypus_20novemcinctus_20[refseq_20GCF_5F000208655.1_202012-01-06] 46,559 sequences; 3,631,522,711 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq42892 93.3 5e-14 seq22562 87.8 2e-12 seq25138 86.0 8e-12 seq22610 86.0 8e-12 seq25020 84.2 3e-11 >seq42892 Length=2148417 Score = 93.3 bits (102), Expect = 5e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 22635 ACTTCTCTTATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCC 22694 ||||| ||||||||||| || |||| | || || ||||| | || ||| ||| Sbjct 1711597 ACTTCCTCTATTTCTGGATAAAAAATCCGTTCACAAATCAGCTGTGCAATTCAATCACCC 1711656 Query 22695 TTATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTG 22754 || || || | ||| || || | ||||||||| | || | ||| | |||||| || Sbjct 1711657 TTTTTCACTTCAAACTTTTCTTTGCCAAAATTAAAAAGCACAACACCAACATTTCCTCTA 1711716 Query 22755 TAATCTCTATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGAT 22814 |||||| |||||| ||||| || |||||||| || | || || ||||| || || Sbjct 1711717 TAATCTTCATCTATGACACCAGCTCCTACATCTATGGAGTGTTTTGCAGCCAAGCCAGAA 1711776 Query 22815 CTAGGAGATATTCTTCCATATAATCC 22840 | |||| || ||||||||| |||| Sbjct 1711777 CGCGGAGCTACTCTTCCATAACATCC 1711802 >seq22562 Length=5896070 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 22635 ACTTCTCTTATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCC 22694 ||||| ||||||||||| || |||| | || || ||||| | || ||| ||| Sbjct 4828812 ACTTCCTCTATTTCTGGATAAAAAATCCGTTCACAAATCAGCTGTGCAATTCGATCACCC 4828871 Query 22695 TTATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTG 22754 || || || | ||| || || | ||||||||| | || | ||| | |||||| || Sbjct 4828872 TTTTTCACTTCAAACTTTTCTTTGCCAAAATTAAAAAGCACAACACCGACATTTCCTCTA 4828931 Query 22755 TAATCTCTATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGAT 22814 |||||| |||||| ||||| || || ||||| || | || || ||||| || || Sbjct 4828932 TAATCTTCATCTATGACACCAGCTCCGACATCTATGGAGTGTTTTGCAGCCAAGCCAGAA 4828991 Query 22815 CTAGGAGATATTCTTCCATATAATCC 22840 | |||| || ||||||||| |||| Sbjct 4828992 CGCGGAGCTACTCTTCCATAACATCC 4829017 >seq25138 Length=5184318 Score = 86.0 bits (94), Expect = 8e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22635 ACTTCTCTTATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCC 22694 ||||| ||||||||||| || |||| | || || ||||| | || ||| ||| Sbjct 3339004 ACTTCCTCTATTTCTGGATAAAAAATCCGTTCACAAATCAGCTGTGCAATTCGATCACCC 3339063 Query 22695 TTATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTG 22754 || || || | ||| || || | ||||||||| | || | ||| | |||||| || Sbjct 3339064 TTTTTCACTTCAAACTTTTCTTTGCCAAAATTAAAAAGCACAACACCAACATTTCCTCTA 3339123 Query 22755 TAATCTCTATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGAT 22814 |||||| |||||| ||||| | |||||||| || | || || ||||| || || Sbjct 3339124 TAATCTTCATCTATGACACCAGTTCCTACATCTATGGAGTGTTTTGCAGCCAAGCCAGAA 3339183 Query 22815 CTAGGAGATATTCTTCCATA 22834 | |||| || ||||||||| Sbjct 3339184 CATGGAGCTACTCTTCCATA 3339203 >seq22610 Length=454836 Score = 86.0 bits (94), Expect = 8e-12 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 22635 ACTTCTCTTATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCC 22694 ||||| ||||||||||| || | | || | || || ||||| | |||||| ||| Sbjct 1097 ACTTCCTCTATTTCTGGATAAAAAATCTGTCCACAAATGAGCTGTGCAATTCTATCACCC 1038 Query 22695 TTATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTG 22754 || || || | ||| || || | ||||||||| | || | ||| | |||||| || Sbjct 1037 TTTTTCACTTCAAACTTTTCTTTGCCAAAATTAAAGAGCACAACACCAACATTTCCTCTA 978 Query 22755 TAATCTCTATCTATCACACCCGCGCCTACATCGATAAAATG-ATTACATGCCAATCCCGA 22813 |||||| |||| | ||||| || |||||||| || || || ||||| |||| || || Sbjct 977 TAATCTTCATCTGTGACACCAGCTCCTACATCTATGAAGTGTTTTACA-GCCAGTCAAGA 919 Query 22814 TCTAGGAGATATTCTTCCATA 22834 |||| || | ||||||| Sbjct 918 ATGTGGAGCTACTGTTCCATA 898 >seq25020 Length=671247 Score = 84.2 bits (92), Expect = 3e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 22635 ACTTCTCTTATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCC 22694 ||||| ||||||||||| || |||| | || || ||||| | || ||| ||| Sbjct 224251 ACTTCCTCTATTTCTGGATAAAAAATCCGTTCACAAATCAGCTGTGCAATTCGATCACCC 224310 Query 22695 TTATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTG 22754 || || || | ||| || || | ||||||||| | || | ||| | |||||| || Sbjct 224311 TTTTTCACTTCAAACTTTTCTTTGCCAAAATTAAAAAGCACAACACCGACATTTCCTCTA 224370 Query 22755 TAATCTCTATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGAT 22814 |||||| |||||| ||||| || || ||||| | | || || ||||| || || Sbjct 224371 TAATCTTCATCTATGACACCAGCTCCGACATCTGTGGAGTGTTTTGCAGCCAAGCCAGAA 224430 Query 22815 CTAGGAGATATTCTTCCATATAATCC 22840 | |||| || ||||||||| |||| Sbjct 224431 CGCGGAGCTACTCTTCCATAACATCC 224456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602829756314160