Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dasypus_20novemcinctus_20[refseq_20GCF_5F000208655.1_202012-01-06] 46,559 sequences; 3,631,522,711 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq1970 152 4e-32 seq28971 102 7e-17 seq17376 86.0 5e-12 >seq1970 Length=734494 Score = 152 bits (168), Expect = 4e-32 Identities = 132/164 (80%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || |||| ||| || |||||||| ||||| |||| |||||||||||||| || || Sbjct 336875 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGAGCATAGCTGGCGATGTTGAAAGGC 336934 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || ||||| |||||||| ||||||| |||||||||||| ||||| ||||| || || | Sbjct 336935 ACGCCGAGGCCCATGTCTCCCGACCGCTGGTAGAGCTGGCACGAAAGCTCACCACTGCCC 336994 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105 ||||| ||||| || | ||||||||||| || || ||||| || Sbjct 336995 ACGTAGAACTGGCAAAGAGCGTGGCACGGCGGCAGTGCCATCAG 337038 Score = 120 bits (132), Expect = 2e-22 Identities = 128/169 (76%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 30222 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30281 |||| || |||| ||||| || |||||||||||||| || || || || || |||| || Sbjct 340895 TCATATCTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCCAAGT 340954 Query 30282 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30341 |||| ||||| ||| ||| ||| |||||||||||| | ||| || ||||||| Sbjct 340955 CTCCTTCTTCTCTGGTGGAGAATCCCAGGCCGTCCAAAAAGTCGCGGGATCCATTGGCGT 341014 Query 30342 CCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCC 30390 ||||||| || || || || |||||||||||| | |||||||| || Sbjct 341015 CCCAGATTTTCACTCCTTTGGAAGAGAGCTCTTTAGCATTTGTGGATCC 341063 >seq28971 Length=706216 Score = 102 bits (112), Expect = 7e-17 Identities = 182/259 (70%), Gaps = 10/259 (4%) Strand=Plus/Minus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 110438 ||||||||| ||||| || | || || || ||||| |||| || || ||||| | Sbjct 87705 ATGAGCTCCTTGGGGGGGTTCCCTGAGTTCTCTACTGAGAACTATATTAATTCTGTCCTT 87646 Query 110439 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 110498 | ||||| ||| || ||||| ||| ||||||| |||||||||||||| ||||||| || Sbjct 87645 TAAAGGTCAATTTTTCTCGGGAATG-AGAACCAGGTCTTTCTACCCATAATCACCA-ATT 87588 Query 110499 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGAAAGTGTTTAAAATCTTTGCA 110558 ||| || ||| |||||||| | |||| | | || | || | || || | Sbjct 87587 CTGTTTACCTTCTACTGAAGAGACTGTAGTCATTTTTTGGAAATACTTGTACTCATTCCT 87528 Query 110559 AAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACACG 110617 | ||||| |||| |||| |||||||| || |||||||||||| ||||| || Sbjct 87527 GA-----GCAGG-GGCCAGGGCATGTCTCCGTTCTTGCCGATGCCCATGTTCTGG-GACA 87475 Query 110618 CGGCCACGATACCGTTCAG 110636 ||| || |||| ||| || Sbjct 87474 CGGTGACAATACAGTTTAG 87456 >seq17376 Length=3367665 Score = 86.0 bits (94), Expect = 5e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 110404 AGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATG 110463 || || || ||||| |||| || || ||||| | | ||||| ||| || || || ||| Sbjct 1036757 AGTTCTCTACTGAGAACTATATTAATTCTGTCCTTTAAAGGTCGATTTTTCTCAGGAATG 1036816 Query 110464 GAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 |||||||| |||||||||||||| ||||||| ||||| || ||| Sbjct 1036817 GAGAACCAGGTCTTTCTACCCATAATCACCAAATTCTGTTTACCT 1036861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406079844115428