Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthisitta_20chloris_20[refseq_20GCF_5F000695815.1_202014-05-27] 53,875 sequences; 1,035,876,403 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq30931 116 3e-21 >seq30931 Length=27074 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | |||| ||||| ||||| || ||||| ||||| | |||||| | | ||| Sbjct 264 AGCACGAGGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCC 205 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| || || || | || || ||||||||||| ||| | ||||||||||| Sbjct 204 TCCAGCTGCTTCCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATACCTTCCTTGTCC 145 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||||| | | | ||||||| |||||| ||||| ||| |||||| Sbjct 144 TGGATCTTGGCCTTCACGTTCTCAATGGTATCACTGGGCTCAACTTCCAGGGTGATGGTC 85 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || | || || || || || ||||| Sbjct 84 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 53 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421981943949500