Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthisitta_20chloris_20[refseq_20GCF_5F000695815.1_202014-05-27] 53,875 sequences; 1,035,876,403 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq11599 145 6e-30 >seq11599 Length=78777 Score = 145 bits (160), Expect = 6e-30 Identities = 134/170 (79%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| | || | ||||||||||||||||| ||| | || ||||| ||||| |||| || Sbjct 73322 AGATATTTCTCTGATGGCTTTGCCTCCATGCCATGTCCTTTGCCAGTTTTATGTTGTAAA 73263 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | ||||||||| || ||| | ||||| || || | ||||||||||| || || ||||| Sbjct 73262 TGGTGAATTGTCTTGCCAACTCTATCAGCGGTCTGGAGATATGGGACTAGGAGTGCCTTT 73203 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 ||||||||| || ||| | ||||| || || |||||||| ||||| |||| Sbjct 73202 CAATATTGCCAGCTATTCACTGCTCACTTACATGATTGCCCATGTCACAG 73153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398921895161875