Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthisitta_20chloris_20[refseq_20GCF_5F000695815.1_202014-05-27] 53,875 sequences; 1,035,876,403 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq34970 87.8 2e-12 >seq34970 Length=16158 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 116460 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 116519 ||||||||| |||||||| | ||| || || |||| || | ||| |||||||| Sbjct 7819 CTCATCCTTGCTGGTGTACTCCACAATCTCAGTGCACAGGTTGCTGCACTTGATGGTGCC 7878 Query 116520 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCC 116579 || ||||| || || ||| |||| || | |||||||||||||| || || || || Sbjct 7879 CAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGAGTCCTTGTAGAGCATGTAAGGAGTGCC 7938 Query 116580 CGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 |||||||| ||||||| || || || | ||| Sbjct 7939 AGTCTCCGTCTGGGACTCGATGATGGCATACCA 7971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613094041245000