Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthisitta_20chloris_20[refseq_20GCF_5F000695815.1_202014-05-27] 53,875 sequences; 1,035,876,403 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq30931 122 2e-22 >seq30931 Length=27074 Score = 122 bits (134), Expect = 2e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| || ||||| || || || ||||| |||| ||||||||||| || || | ||||| Sbjct 265 CAGCACGAGGTGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 206 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||||||||| || |||||||| || | ||||||||| || ||| ||||| || Sbjct 205 CTCCAGCTGCTTCCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGAATACCTTCCTTGTC 146 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||||||| || | ||| || | | || || |||| ||||| || Sbjct 145 CTGGATCTTGGCCTTCACGTTCTCAATGGTATCACTGGGCTCAACTTCCAGGGTGATGGT 86 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || ||||| || || || Sbjct 85 CTTGCCAGTCAGGGTCTTCACGAAGATCTG 56 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178107821734625