Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthisitta_20chloris_20[refseq_20GCF_5F000695815.1_202014-05-27] 53,875 sequences; 1,035,876,403 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq5984 129 7e-25 >seq5984 Length=37620 Score = 129 bits (142), Expect = 7e-25 Identities = 106/129 (82%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 ||||||||||| || | |||||||||||| || | ||| |||||||| ||||| || || Sbjct 3007 TCATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTCTTCTTC 2948 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | |||||| |||| |||||| || ||||||||||| || ||||| || |||||||| ||| Sbjct 2947 AGCCAAAAAATTGATGCAAAGGAGCCAGAAAAGAAGATTCCTTCCACAGCTGCAAAAGCT 2888 Query 37320 ACAAGACGT 37328 || | |||| Sbjct 2887 ACTACACGT 2879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591917911655000