Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthisitta_20chloris_20[refseq_20GCF_5F000695815.1_202014-05-27] 53,875 sequences; 1,035,876,403 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq17648 91.5 1e-13 >seq17648 Length=11779 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 48570 GTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCG 48629 |||||| | || ||||||||||| ||||| || ||||| | || |||| |||||| ||| Sbjct 415 GTGCTCACCTTCTGAATATTGTAGTCAGACAGTGTTCGACCATCTTCCAGCTGCTTCCCG 356 Query 48630 GCAAATATCAGTCGCTGTTGATCCGTGGGAACGCC 48664 || || ||||| ||||| ||||||| ||||| ||| Sbjct 355 GCGAAGATCAGCCGCTGCTGATCCGGGGGAATGCC 321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380687475776625