Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthisitta_20chloris_20[refseq_20GCF_5F000695815.1_202014-05-27] 53,875 sequences; 1,035,876,403 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq34970 100 3e-16 seq14405 91.5 2e-13 >seq34970 Length=16158 Score = 100 bits (110), Expect = 3e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | || || || | || |||||||||||||| || || || ||||| |||||||| Sbjct 7971 TGGTATGCCATCATCGAGTCCCAGACGGAGACTGGCACTCCTTACATGCTCTACAAGGAC 7912 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 | || |||| |||||| ||||| |||| |||| || |||||| || || || ||| Sbjct 7911 TCCTGCAACAGGAAGAGCAACCAGCAGAACCTGGGCACCATCAAGTGCAGCAACCTGTGC 7852 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 || || ||| | |||||||| ||||||||| Sbjct 7851 ACTGAGATTGTGGAGTACACCAGCAAGGATGAG 7819 >seq14405 Length=70954 Score = 91.5 bits (100), Expect = 2e-13 Identities = 96/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145 |||| ||||| ||||| || ||||||||||| || || || ||| ||||| | |||| Sbjct 59630 TTGCCTTTGCTGCAGTGGAAGGCATCTTCTTCTCGGGTTCCTT-TGCTGCTATATTTTGG 59572 Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205 |||||||| |||| || ||||| || || ||||| |||||||||||| | ||||| Sbjct 59571 CTGAAGAAGAGGGGCCTAATGCCTGGACTGACTTTCTCCAATGAACTTATTAGCAGAGAT 59512 Query 65206 GAGG 65209 |||| Sbjct 59511 GAGG 59508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596167847660000