Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthisitta_20chloris_20[refseq_20GCF_5F000695815.1_202014-05-27] 53,875 sequences; 1,035,876,403 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq5984 98.7 2e-15 >seq5984 Length=37620 Score = 98.7 bits (108), Expect = 2e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 39167 TTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGC 39226 ||||||| |||||| | ||| ||||||||||||||||| || |||||||| |||||||| Sbjct 2990 TTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTCTTCTTCAGCCAAAAAATTGATGC 2931 Query 39227 AAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCTATTA 39273 ||| | ||||||||| || || |||||| ||||| |||| || Sbjct 2930 AAAGGAGCCAGAAAAGAAGATTCCTTCCACAGCTGCAAAAGCTACTA 2884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904526447475000