Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthisitta_20chloris_20[refseq_20GCF_5F000695815.1_202014-05-27] 53,875 sequences; 1,035,876,403 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq5984 89.7 1e-12 >seq5984 Length=37620 Score = 89.7 bits (98), Expect = 1e-12 Identities = 95/123 (77%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGG-TGCTTTCTGTGCTATCTTTTG 131922 ||||||||||| ||| ||||| || |||||||| || | |||| | | || ||||| Sbjct 2886 GTAGCTTTTGCAGCTGTGGAAGGAATCTTCTTTTCTGGCTCCTTTGCAT-CAATTTTTTG 2944 Query 131923 GCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGA 131982 ||| |||||| | ||||| |||||||||||| | || || ||| || ||||| ||||| Sbjct 2945 GCTGAAGAAGAGAGGATTAATGCCTGGACTCACTTTTTCTAATGAACTCATCAGTAGAGA 3004 Query 131983 TGA 131985 ||| Sbjct 3005 TGA 3007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185993574648875