Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthisitta_20chloris_20[refseq_20GCF_5F000695815.1_202014-05-27] 53,875 sequences; 1,035,876,403 total letters Query= NC_028099.1 Length=122522 Score E Sequences producing significant alignments: (Bits) Value seq11599 102 6e-17 >seq11599 Length=78777 Score = 102 bits (112), Expect = 6e-17 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 111778 CCAGTGATGTGTGCAATCATGTATGTGAGTAGACTGTAACTAGCAATGTTAAATGGCACA 111837 || |||| || ||||||||||| ||||| || || || ||||| || || ||||| Sbjct 73152 CCTGTGACATGGGCAATCATGTAAGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACT 73211 Query 111838 CCTAGGCCCATATCTCCCGATCTTTGATATAGCTGACATGATAGTTTATTTTGTGACACA 111897 ||||| ||||||||||| || | ||||| || || || || | || | | | ||| Sbjct 73212 CCTAGTCCCATATCTCCAGACCGCTGATAGAGTTGGCAAGACAATTCACCATTTACAACA 73271 Query 111898 TAAAATTGACAAAGTACATGACAAGGAGGCAATGCCATC 111936 ||||| || ||||| ||||| || |||||||| |||||| Sbjct 73272 TAAAACTGGCAAAGGACATGGCATGGAGGCAAAGCCATC 73310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391688247906625