Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthisitta_20chloris_20[refseq_20GCF_5F000695815.1_202014-05-27]
53,875 sequences; 1,035,876,403 total letters
Query= NC_028379.1
Length=205896
Score E
Sequences producing significant alignments: (Bits) Value
seq41690 196 6e-45
>seq41690
Length=853
Score = 196 bits (216), Expect = 6e-45
Identities = 267/369 (72%), Gaps = 4/369 (1%)
Strand=Plus/Plus
Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730
|| || |||| || |||| ||||| |||||||| ||||| || ||||||||| ||||
Sbjct 188 CCGCTCAGCCAAGAGGAGGCAGAGTTCCCCATCGCTTACTCCATGGTGATCCACAACAAA 247
Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790
||||||||||||||| | |||||| || | ||||||| || ||||| ||||||| |||
Sbjct 248 ATCGAGATGTTCGAGAGGCTCCTGCGGTCTCTCTACGCTCCCCAGAATATCTACTGTGTC 307
Query 13791 CACGTGGACTCCAAGTCCGGCGACGAGTTCATCCGG-GGC-GTCTCGGCCATCGCCAGGT 13848
||| | ||| ||||||| | || ||| | || ||| || ||||||||| | |
Sbjct 308 CACATCGACAGCAAGTCCCCGGCTGAATTC--CAGGAGGCTGTGCGGGCCATCGCAGGCT 365
Query 13849 GCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTC 13908
||||||| ||||| | ||||| || ||| | |||||| || | ||||||| |
Sbjct 366 GCTTCCCCAACGTCTTCGTGGCCAGTCGCCTGGAAAGCGTGGTCTATGCCTCCTGGTCCC 425
Query 13909 GCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGT 13968
| ||||||| ||||||| ||||||| ||||||| ||| || ||| | |
Sbjct 426 GGCTGCAGGCTGACCTCAACTGCATGCAGGACCTGCTGCAGAGCCCTGTGCCTTGGCGCT 485
Query 13969 ACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGG 14028
|| | |||||| ||||| | |||||||| ||||||||||| ||||| || || |
Sbjct 486 ACATCCTCAACACCTGCGGCACCGACTTCCCCATCAAGACCAACGCCGAGATTGTCCGTG 545
Query 14029 CGCTGAAGG 14037
| |||||||
Sbjct 546 CCCTGAAGG 554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658295580320000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |