Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq2530 163 3e-35 seq488 105 8e-18 >seq2530 Length=1020278 Score = 163 bits (180), Expect = 3e-35 Identities = 201/275 (73%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178 |||| |||||| | || | | |||||||||||||||||||| | |||||||||||| Sbjct 1015232 GGGCACGCCGTCCGGGCCGATGAGGAACTTCTCGAAGTTCCAGGAGATGTCGTTGCGGCA 1015173 Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238 |||||| |||||| ||| |||||||| | ||| |||| | ||| ||| || Sbjct 1015172 CACTGGGGACCAGATGATGTACTGGGGGTTGGTCATCAGCGAGGAGGGGTCATCGTGCGG 1015113 Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTC 83298 || || |||||| ||||||| |||||| || || || | | ||||| ||||| Sbjct 1015112 GAAGGGTAGCGCCTCTTTGAGGAAGGTGAAGAGGGGGTGCGCGTTCCCCCCGTTAACCTC 1015053 Query 83299 GCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAG 83358 |||||||||||| | || ||||| |||| | | || ||||||||||||||||||| || Sbjct 1015052 GCACTTCTCGAACANGATGAAGTTGGGCTTGTACCCCTTCCCAGGACGGACGTGCTCTAG 1014993 Query 83359 GGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCT 83393 || || |||||| | ||| || ||||||| Sbjct 1014992 CGACAACAGGATCTCCTCGTTCGTCGCATTTTCCT 1014958 >seq488 Length=78604 Score = 105 bits (116), Expect = 8e-18 Identities = 117/154 (76%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 83388 TTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTA 83447 || ||||| ||||||||||| || ||||| || ||||| ||||||| ||| | || Sbjct 39050 TTACCTGGAAGCCGAACTGGTTGCAGGGGAAGCCCAGCACCACCAGCCGCCGGGGG--TA 39107 Query 83448 GGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACG 83507 | | | ||| |||| ||| | ||| ||||| ||||| |||||| |||||||| || | Sbjct 39108 GCGGGC-CTGGAGCTGGTTGAGCTGGGTGTAATCCCGCACCGTGGAGCCTCAGAGCGATG 39166 Query 83508 CTACGTTCTCGATGAGCAAGACCCGGCCCCGTAA 83541 | |||||||||||||| | || |||||||| || Sbjct 39167 CCACGTTCTCGATGAGGACCACGCGGCCCCGGAA 39200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608772204609280