Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2787 116 4e-21 seq454 93.3 4e-14 seq2913 87.8 2e-12 >seq2787 Length=631671 Score = 116 bits (128), Expect = 4e-21 Identities = 94/114 (82%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||||||| || ||||||||||| ||||| || |||||||| || |||| ||| Sbjct 600514 GAGCCGCTGCTGCGGGACAACCCCCGCCGCTTCGTCATATTCCCCATCCAGTACCACGAC 600455 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTG 116689 || |||| ||||| || ||||| ||||| || |||||||| | ||||||||| Sbjct 600454 ATTTGGCAGATGTANAAGAAGGCTGAGGCCTCCTTCTGGACGGCGGAGGAGGTG 600401 >seq454 Length=77888 Score = 93.3 bits (102), Expect = 4e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 || |||||| |||||||||| || ||||||| ||||| || |||||||| |||| || Sbjct 66385 GGGATCCCCCCGGACCAGCAGCGCCTCATCTTTGCGGGGAAGCAGCTGGAGGACGGCCGG 66444 Query 40852 ACCCTCAACGACTACAACATCCAGAA 40877 |||||| |||||||||||||||||| Sbjct 66445 ACCCTCGCCGACTACAACATCCAGAA 66470 >seq2913 Length=504153 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| ||||| || || || || ||| ||||||||||||| || || || ||||||| Sbjct 490586 TGGTTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCTATATTTT 490645 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| | ||||| ||||| || ||||||||| ||| || || || ||| | Sbjct 490646 GGCTGAAGAAGAGGGGCCTGATGCCAGGGCTGACTTTCTCCAATGAACTTATTAGCAGAG 490705 Query 117162 ACGAGG 117167 | |||| Sbjct 490706 ATGAGG 490711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515198385144320