Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq2737 86.0 4e-12 seq2882 82.4 5e-11 >seq2737 Length=690536 Score = 86.0 bits (94), Expect = 4e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 19957 AAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATTT 20016 |||||||||||||||||||||| || ||||||||| |||||||||||| | | ||||| Sbjct 176634 AAAGTTCTTTTCAACTTTCCCTTACAGTACTTGTTGGCTATCGGTCTCATGCTGGTATTT 176693 Query 20017 AGCCTTA 20023 ||||||| Sbjct 176694 AGCCTTA 176700 >seq2882 Length=529265 Score = 82.4 bits (90), Expect = 5e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||| |||||||||||| || || ||||||||| |||||| |||| | Sbjct 138735 CTCTCTCTTCAAAGTTATTTTCAACTTTCTCTTACTGTACTTGTTAGCTATCAGTCTTGT 138676 Query 20007 GGTAATATTTAGCCT 20021 | || || | ||||| Sbjct 138675 GCTAGTAATGAGCCT 138661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334934006429792