Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq155 123 5e-23 seq2913 87.8 3e-12 >seq155 Length=184411 Score = 123 bits (136), Expect = 5e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 244322 CCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA 244381 || |||||||| || |||||||| || ||||| || | || ||| |||| | Sbjct 10388 CCTTTGCTGACAGGAGAACCCTCGTATGTTTCATAGGGTCCCTGCTCCTTGGCAAGCTCA 10329 Query 244382 CAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGC-G 244440 ||||| | || | || |||| |||||||||||||||||| || ||||| | ||| | Sbjct 10328 CAGCTGGCTTCCAAAGCACCGTAATAGATGGTCTCGAAGATCTGCTGGTTCAGG-CGCTG 10270 Query 244441 GGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCAC 244500 ||||| | | ||||||| | ||||| |||||| | || ||||| |||||||| Sbjct 10269 GGCCTCGGGACTCTCAAAGGGGAACCTCATCAGGATGAAGGCATCTGCCAGGCCCTGCAC 10210 Query 244501 GCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGC 244537 |||||||||||||| | ||| ||| ||||||||||| Sbjct 10209 CCCGATGCCGATGGGACGGTGGCGCCTGTTGGAGCGC 10173 Score = 107 bits (118), Expect = 4e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 244706 ACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTG 244765 |||||||| | |||| |||| || || || || || ||||| ||||| ||||||||| Sbjct 7021 ACCTCCTCTTTGCTGGTATACTCCACGATTTCTGTACACAGGTTGCTGCATTTGATGGTG 6962 Query 244766 CCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCC 244825 ||||||| ||| || ||| ||| |||||||| ||| |||||||||||| |||| Sbjct 6961 CCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTAGGGTGTG 6902 Query 244826 CCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTG 244885 |||||||| ||| | ||| || | || |||||| | | ||||| ||| |||| Sbjct 6901 CCGGTCTCAGTCTGTGACTCGATGATGGAGTACCAGAGCTGCTGGGCCTTCACCACCCTG 6842 Query 244886 CG 244887 || Sbjct 6841 CG 6840 >seq2913 Length=504153 Score = 87.8 bits (96), Expect = 3e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || ||||| |||| |||||| | || || || ||||||||||| ||||| |||| || Sbjct 490576 GGTGAGAGAGTGGTTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCT 490635 Query 42756 TCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTC 42815 | || || ||||| ||| ||| || |||||| || || || ||||| || ||||| Sbjct 490636 GCTATATTTTGGCTGAAGAAGAGGGGCCTGATGCCAGGGCTGACTTTCTCCAATGAACTT 490695 Query 42816 ATCAGCAGGGACGAGG 42831 || ||||| || |||| Sbjct 490696 ATTAGCAGAGATGAGG 490711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944301048696320