Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2507 93.3 2e-13 seq37 86.0 2e-11 >seq2507 Length=1053364 Score = 93.3 bits (102), Expect = 2e-13 Identities = 85/107 (79%), Gaps = 3/107 (3%) Strand=Plus/Plus Query 451190 AAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTCCT 451246 |||| |||||| |||||||||| || | ||||| | || ||||| ||||||||| Sbjct 925384 AAAGCCAAGCCCCATATTCAAGTTGATGTTGGAGGTGGACAGACAAAAACATTTGCTCCT 925443 Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293 ||||||||||| ||||||| || || || ||||| ||||||||||| Sbjct 925444 GAAGAAATTTCTGCTATGGTCCTGACAAAGATGAAGGAAACAGCAGA 925490 >seq37 Length=2074313 Score = 86.0 bits (94), Expect = 2e-11 Identities = 166/243 (68%), Gaps = 14/243 (6%) Strand=Plus/Plus Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTT----GTC 451953 || |||||||| || || || ||||| || ||||| || || ||| | || | | | Sbjct 955507 GAGATTGTGCTGGTGGGTGGCTCTACCCGTATTCCCAAGATCCAAAAGCTGCTACAGGAC 955566 Query 451954 TTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATA 452013 ||||| | || ||| | || |||||| | || || ||||| |||||||| || Sbjct 955567 TTCTTCAAT----GGCAAAGAGCTCAACAAGAGCATCAACCCCGATGAGGCTGTTGCTTA 955622 Query 452014 TGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGAGA 452070 |||||||| || ||||||||||| || | || ||| | ||| || | || Sbjct 955623 CGGTGCTGCTGTGCAAGCAGCTATCCTCATGGG---AGACAAGTCTGAGAATGTGCAGGA 955679 Query 452071 TATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGAT 452130 | | ||| | | ||||| || ||||| || | || |||| |||||||||||| |||| Sbjct 955680 TCTGCTGCTGTTGGATGTCACCCCTCTGTCCTTGGGCATTGAGACAGCTGGTGGAGTGAT 955739 Query 452131 GAC 452133 ||| Sbjct 955740 GAC 955742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975636585501056